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GPA33 (glycoprotein A33 (transmembrane))

Identity

Other namesA33
MGC129986
MGC129987
HGNC GPA33
Location 1q24.1
Location_base_pair Starts at 165288706 and ends at 165326492 bp from pter ( according to hg18-Mar_2006).
 
Note Location of GPA33 on human chromosome 1q24 showing flanking genes to demonstrate synteny to other vertebrates, such as mouse (chromosome 1) and zebrafish (chromosomes 1 and 9). Note that an evolutionary duplication event of the entire zebrafish genome has resulted in the two copies of gpa33 in zebrafish.

DNA/RNA

 
  Genomic organization of the GPA33 gene. Coding exonic sequences appear in red, non-coding exonic sequences are in blue and intronic sequence are in yellow, with the corresponding exon and intron sizes given below in base pairs (bp). The exon numbers are indicated above each exon. Note the GPA33 gene is in on the reverse strand.
Description The human GPA33 gene comprises 7 exons (all coding) spanning 37,787 bp of genomic DNA.
Transcription 2,793 bp mRNA; 960 bp open reading frame (Heath et al., 1997).

Protein

 
  Schematic representation of the GPA33 protein, indicating the position of the Ig-like V-type and Ig-like C2-type domain in the extracellular region and the polycysteine residue ('CCCC' motif).
Description 319 amino acids; 43 kDa protein. The A33 glycoprotein is a member of the immunoglobulin superfamily and contains three distinct structural domains: a 213 amino acid extracellular region containing two immunoglobulin-like domains (a C2-type domain and a v-type domain), a 23 amino acid hydrophobic transmembrane domain, and a 62 amino acid highly polar intracellular tail containing four consecutive cysteine residues (Heath et al., 1997). Post translational modification includes N-glycosylation (containing approximately 8 kDa of N-linked carbohydrate), and S-palmitoylation. The S-palmitoylation may be involved in regulating the internalization process initiated by binding of the monoclonal antibody A33 to the A33 antigen. There is no evidence of O-glycosylation, sialylation or glycophosphatidylinositol (Ritter et al., 1997).
Expression GPA33 demonstrates a rare tissue-specific expression pattern. GPA33 is a cell surface differentiation antigen that is constitutively expressed on the basolateral surfaces of normal human and mouse colon and small bowel epithelium. GPA33 is homogeneously expressed in over 95% of both human primary and metastatic colon cancers, and in 55% of gastric carcinomas, although absent in normal stomach epithelium (Welt et al., 1990).
Localisation Membrane; single-pass type 1 membrane protein.
Function Unknown; the protein structure is consistent with a putative role of GPA33 in cell-cell recognition and signaling (Heath et al., 1997). A33 may play a role in relaying information between intestinal epithelial cells and the gut immune system (Lee et al., 2007).
Homology The two Ig-like domains are well conserved between humans, chimpanzee, dog, mouse and rat, whereas chicken and zebrafish retain only the Ig-like V-like domain. The overall GPA33 protein similarity between humans and various species are: chimpanzee (Pan troglodytes) 97%, domestic dog (Canis lupus familiaris) 75%, mouse (Mus musculus) 66%, rat (Rattus norvegicus) 68%, domestic chicken (Gallus gallus) 44%, and zebrafish (Danio rerio) 35%.

Implicated in

Entity Colorectal cancer
Note Colorectal cancer marker.
Although the biochemical, immunological and molecular biology of the A33 antigen has been extensively characterized, the function of the molecule remains unknown. The antigen has several identified properties that contribute to a potential therapeutic target for colon cancer. The A33 antigen is expressed homogenously and at high levels in colorectal carcinomas, there are a high number of A33 binding sites per cell and it is not shed or secreted into the blood stream (Welt et al., 1990). In addition, upon mAB binding to the A33 antigen, the antibody-antigen complex is internalized and sequestered in vesicles (Daghighian et al., 1996).
Selective immunological targeting of tumors with monoclonal antibodies (mAb) is an important therapeutic approach in cancer therapy. Clinical imaging and biopsy-based biodistribution studies using radiolabeled murine mAb A33 demonstrated specific targeting to antigen-positive tumor tissues in 95% of colorectal patients with tumor retention for up to six weeks (Welt et al., 1990; Welt et al., 1994). The only normal tissue reported to accumulate the radioisotope was the bowel, with clearance from the normal gastrointestinal tract within one week. Phase I and II therapy trials using 125I- and 131I-labeled murine A33 mAb were shown to have antitumor effects without bowel toxicity, however human anti-mouse antibody development in all patients prevented repeated dosing and led to the development of humanized mAb A33 (huA33). Phase I clinical trials using multiple dose schedules of 125I- and 131I-labled huA33 mAb in patients with colorectal carcinoma have been conducted and have shown safety and possible efficacy, with future trials proposed (Chong et al., 2005; Scott et al., 2005).
  

External links

Nomenclature
HGNCGPA33   4445
Entrez_GeneGPA33  10223  glycoprotein A33 (transmembrane)
Cards
AtlasGPA33ID40735ch1q23
GeneCardsGPA33
EnsemblGPA33 [Search_View]   ENSG00000143167 [Gene_View]  GPA33 [Vega]
GenatlasGPA33
GeneLynxGPA33
eGenomeGPA33
euGene10223
Genomic and cartography
GoldenPathGPA33  -  1q24.1   chr1:165288706-165326492 -  1q24.1   [Description]    (hg18-Mar_2006)
EnsemblGPA33 - 1q24.1 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneGPA33
Gene and transcription
GenbankAK312833 [ ENTREZ ]
GenbankBC069705 [ ENTREZ ]
GenbankBC069723 [ ENTREZ ]
GenbankBC069745 [ ENTREZ ]
GenbankBC069761 [ ENTREZ ]
RefSeqNM_005814 [ SRS ]    NM_005814 [ ENTREZ ]
RefSeqAC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeqAC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeqNC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeqNT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeqNW_001838532 [ SRS ]    NW_001838532 [ ENTREZ ]
RefSeqNW_926128 [ SRS ]    NW_926128 [ ENTREZ ]
CCDSGPA33 CCDS - NCBI
AceViewGPA33 AceView - NCBI
UnigeneHs.651244 [ SRS ]    Hs.651244 [ NCBI ]     HS651244 [ spliceNest ]
Fast-db17530 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ5VZP6 [ SRS]    Q5VZP6 [ EXPASY ]     Q5VZP6 [ INTERPRO ]     Q5VZP6 [ UNIPROT ] Q5VZP6 [ VarSplice ]
PrositePS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
InterproIPR013151 Ig [ SRS ]    IPR013151 Ig [ EBI ]
InterproIPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
InterproIPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
InterproIPR003598 Ig_sub2 [ SRS ]    IPR003598 Ig_sub2 [ EBI ]
InterproIPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
InterproIPR003596 Ig_V-set_sub [ SRS ]    IPR003596 Ig_V-set_sub [ EBI ]
CluSTrQ5VZP6
PfamPF00047 ig [ SRS ]    PF00047 ig [ Sanger ]    pfam00047 [ NCBI-CDD ]
PfamPF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
SmartSM00408 IGc2 [EMBL]
SmartSM00406 IGv [EMBL]
BlocksQ5VZP6
HPRD03704
Protein Interaction databases
DIPQ5VZP6
IntActQ5VZP6
Polymorphism : SNP, mutations, diseases
OMIM602171    [ map ]   
GENECLINICS602171
SNPGPA33 [dbSNP-NCBI]  
SNPNM_005814 [SNP-NCI]  
SNPGPA33 [GeneSNPs - Utah]  GPA33] [HGBASE - SRS]
HAPMAPGPA33 [HAPMAP]  
HGMDGPA33
Genetic AssociationGPA33
CDC HuGEGPA33
General knowledge
Family BrowserGPA33 [UCSC Family Browser]
SOURCENM_005814
SMDHs.651244
SAGEHs.651244
GOreceptor activity [Amigo]  receptor activity
GOplasma membrane [Amigo]  plasma membrane
GOintegral to plasma membrane [Amigo]  integral to plasma membrane
PubGeneGPA33
TreeFamGPA33
CTD10223 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeGPA33 Related clones (RZPD - Berlin)
PubMed
PubMed8 Pubmed reference(s) in Entrez

Bibliography

Quantitative analysis of antibody localization in human metastatic colon cancer: a phase I study of monoclonal antibody A33.
Welt S, Divigi CR, Real FX, Yeh SD, Garin-Chesa P, Finstad CL, Sakamoto J, Choen A, Sigurdson ER, Kemeny N, Carswell EA, Oettgen HF, Old LJ.
J Clin Oncol 1990; 8(11): 1894-1906.
PMID 2230877
 
Phase I/II study of iodine 131-labeled monoclonal antibody A33 in patients with advanced colon cancer.
Welt S, Divgi CR, Kemeny N, Finn RD, Scott AM, Graham M, Germain JS, Richards EC, Larson SM, Oettgen HF, Old LJ.
J Clin Oncol 1994; 12(8): 1561-1571.
PMID 8040668
 
Enhancement of radiation dose to the nucleus by vesicular internalization of iodine-125-labeled A33 monoclonal antibody.
Daghighian F, Barendswaard E, Welt S, Humm J, Scott A, Willingham MC, McGuffie E, Old LJ, Larson SM.
J Nucl Med. 1996; 37(6): 1052-1057.
PMID 8683300
 
The human A33 antigen is a transmembrane glycoprotein and a novel member of the immunoglobulin superfamily.
Heath JK, White SJ, Johnstone CN, Catimel B, Simpson RJ, Moritz RL, Tu GF, Ji H, Whitehead RH, Groenen LC, Scott AM, Ritter G, Cohen L, Welt S, Old LJ, Nice EC, Burgess AW.
Proc Natl Acad Sci USA 1997; 94(2): 469-474.
PMID 9012807
 
Characterization of posttranslational modifications of human A33 antigen, a novel palmitoylated surface glycoprotein of human gastrointestinal epithelium.
Ritter G, Cohen LS, Nice EC, Catimel B, Burgess AW, Moritz RL, Ji H, Heath JK, White SJ, Welt S, Old LJ, Simpson RJ.
Biochem Biophys Res Commun. 1997; 236(3): 682-686.
PMID 9245713
 
Phase I trial of 131I-huA33 in patients with advanced colorectal carcinoma.
Chong G, Lee FT, Hopkins W, Tebbutt N, Cebon JS, Mountain AJ, Chappell B, Papenfuss A, Schleyer P, U P, Murphy R, Wirth V, Smyth FE, Potasz N, Poon A, Davis ID, Saunder T, O'keefe GJ, Burgess AW, Hoffman EW, Old LJ, Scott AM.
Clin Cancer Res. 2005; 11(13): 4818-4826.
PMID 16000579
 
A phase I trial of humanized monoclonal antibody A33 in patients with colorectal carcinoma: biodistribution, pharmacokinetics, and quantitative tumor uptake.
Scott AM, Lee FT, Jones R, Hopkins W, MacGregor D, Cebon JS, Hannah A, Chong G, U P, Papenfuss A, Rigopoulos A, Sturrock S, Murphy R, Wirth V, Murone C, Smyth FE, Knight S, Welt S, Ritter G, Richards E, Nice EC, Burgess AW, Old LJ.
Clin Cancer Res. 2005; 11(13): 4810-4817.
PMID 16000578
 
Peripheral antigen display by lymph node stroma promotes T cell tolerance to intestinal self.
Lee JW, Epardaud M, Sun J, Becker JE, Cheng AC, Yonekura AR, Heath JK, Turley SJ.
Nat Immunol. 2007; 8(2): 181-190.
PMID 17195844
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written06-2008Tania Tabone, Joan K Heath
Ludwig Institute for Cancer Research, Melbourne Branch, PO Box 2008, Royal Melbourne Hospital, Parkville, VIC 3050, Australia

Citation

This paper should be referenced as such :
Tabone T, Heath JK . GPA33 (glycoprotein A33 (transmembrane)). Atlas Genet Cytogenet Oncol Haematol. June 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/GPA33ID40735ch1q23.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sun Nov 9 19:41:18 2008


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