IDO1 (indoleamine 2,3-dioxygenase 1)

2009-03-01   Mee Young Chang , Alexander J Muller , George C Prendergast 

Lankenau Institute for Medical Research, 100 Lancaster Avenue, Wynnewood PA 19096, USA

Identity

HGNC
LOCATION
8p11.21
LOCUSID
ALIAS
IDO,IDO-1,INDO
FUSION GENES

DNA/RNA

Description

The human IDO1 gene is encoded on 10 exons which span 14,163 bps at chromosome 8p12-p11 (nucleotides 39,890,485-39,905,107). The murine IDO1 gene is similarly sized and localized to a syntenic locus on mouse chromosome 8A2.

Transcription

Transcription of the human IDO1 gene produces a full-length mRNA transcript of 1,572 nt. The promoter includes transcription factor sites that confer responsiveness to type I and type II interferons (IFN-alpha / IFN-beta and IFN-gamma respectively), most potently to IFN-gamma. Many cell types strongly increase IDO transcription after exposure to IFN-gamma, including myeloid cells (monocyte/macrophages and dentritic cells), fibroblasts, endothelial cells, epithelial cells and many tumor cell lines. STAT and IRF transcription factors function cooperatively to mediate induction of IDO1 expression by IFN-gamma, and mice lacking either IFN-gamma or IRF1 function are deficient in IDO1 expression during infections.

Pseudogene

None known.

Proteins

Description

The IDO1 gene encodes a full-length protein of 403 amino acids with a predicted molecular weight of 45,332 Daltons. The open reading frame is preceded by a long, untranslated sequence. There is no Kozak consensus sequence present at the ATG start site in the open reading frame.

Expression

IDO1 is widely expressed in the body. High expression is seen in placental trophoblast giant cells of fetal origin, epididymis, gut (distal ileum and colon), lymph nodes, spleen, thymus and lung. IDO activity in many of these locations is markedly increased in vivo by LPS treatment. With the exception of epididymis, a common feature of sites of expression are extensive mucosal surfaces and/or large lymphoid compartments with immunoregulatory roles. IDO1 is overexpressed in many human diseases including cancer, chronic infectious disease, allergy, autoimmune disease and other disorders characterized by local immune suppression.

Localisation

IDO1 is a cytosolic enzyme with no known secreted or extracellular form.

Function

IDO1 is a single-chain oxidoreductase catalyzing the first, rate-limiting step of tryptophan degradation in biosynthesis of the central metabolic regulator nicotinamide adenine dinucleotide (NAD) along the kynurenine pathway. In mammals, IDO1 does not catabolyze excess dietary tryptophan, which is carried out by the liver enzyme TDO2, and NAD levels are not maintained by synthesis but by salvage from the diet. Thus, the role of IDO1 in mammals was obscure until it was discovered to be strongly induced by IFN-gamma and linked to immune control. The function of IDO1 in immune control is based on broad evidence that tryptophan depletion and/or kynurenine production suppresses T cell-mediated immunity. In particular, IDO1-mediated tryptophan catabolism in antigen-presenting dendritic cells appears to be an important mechanism to generate immune tolerance to cross-presented neoantigens, such as those that arise during allogeneic pregnancy or cancer.
Antiproliferation : Tryptophan catabolism by IDO1 has been suggested to mediate antiproliferative effects during infection, including directly on infectious microorganisms that may rely on tryptophan for growth. With regard to the function of IDO1 in immune regulation, tryptophan depletion in the vicinity of an antigen presentation event has been suggested to limit T cell activation by preventing the cell division required by T cells to become activated upon appropriate presentation of antigen. Dendritic cells arising from monocytes acquire the ability to act as regulatory cells that suppress T cell proliferation through tryptophan catabolism by IDO1. The 1-methyl analogue of tryptophan (1MT) has been used widely to block IDO activity. When T cells are deprived of tryptophan, they arrest at a mid-G1 phase of the cell cycle. Restoring tryptophan does not restore the activation process, which requires a second round of T cell receptor signaling along with tryptophan. Together this information has suggested that antigen-presenting cells can employ IDO1 to restrict T cell activation by blocking T cell proliferation, due to tryptophan catabolism.
Apoptosis : The products of tryptophan catabolism by IDO1 include kynurenine and downstream products of the so-called kynurenine pathway that can induce apoptosis of thymocytes and Th1 but not Th2 helper T cells. Apoptosis induced by these products does not require Fas/Fas ligand interactions but are associated with activation of caspase-8 and the release of cytochrome c from mitochondria. When administered in vivo, some kynurenines can deplete specific thymocyte subsets like dexamethasone. Thus, the selective deletion of T lymphocytes by kynurenine production has been suggested as one mechanism through which tryptophan catabolism could blunt immunity under pathologic conditions.
Immune tolerance : Many studies illustrate how IDO1 overexpression can blunt immune responses to neoantigens. Cell lines overexpressing IDO1 limit antigen-specific T cell responses in vitro. In murine tumor cell lines, IDO1 overexpression renders tumor allografts resistant to immune rejection in vivo. Adenoviral-mediated IDO1 gene transfer into pancreatic islet cells is reported to prolong survival in allogeneic hosts. Similarly, ectopic expression of IDO1 is found to protect allogeneic lung transplants from rejection. CTLA-4 signaling induces IDO and pre-treatment of mice with CTLA-4-Ig to induce IDO expression suppresses rejection of pancreatic islet allografts. In a model of graft-versus-host disease, IDO1 overexpression completely blocks clonal expansion of alloreactive T-cell receptor (TCR)-transgenic T cells. Studies in other tissue allograft models confirm that IDO is a potent regulator of adaptive immune response. A consistent picture is provided by studies employing the pharmacological agent 1MT as an IDO inhibitor. 1MT exacerbates symptoms of experimental autoimmune encephalomyelitis and abrogates the tolerogenic effects of CTLA4-Ig treatment in an islet-cell transplant model. Similarly, 1MT increases disease severity and mortality in a T cell-dependent colitis model, suggesting the role of IDO in the downregulation of Th1 responses within the gastrointestinal tract. Lastly, as discussed in more detail below, 1MT corrects immune escape mediated by IDO in a variety of allograft and transgenic (autochthonous) mouse models of cancer.
Maintenance of Pregnancy : IDO1 has been suggested to mediate immune tolerance during pregnancy on the basis of the ability of IDO inhibitor 1MT to act as an abortifacient in allogeneic but not syngeneic mice. IDO1 gene knockout studies do not replicate this effect suggesting a compensatory genetic effect or an IDO1-dependent effect of 1MT. Indeed, 1MT is no longer active in IDO1 knockout mice, demonstrating that 1MT must target IDO1 mediate its effects.
Null phenotype in mouse : IDO1-deficient mice are viable and fertile. in vitro generation of antigen-presenting dendritic cells (DCs) from IDO1-deficient bone marrow precursors appeared to be affected in the presence of GM-CSF, however, changing growth factor and adherence conditions abolished the observed differences (Flt3L and low-adherence dishes). Moreover, IDO1-deficient mice display a normal DC compartment in vivo and do not develop lethal autoimmune or lymphoproliferative disorders. Consistent with this observation, mice treated systemically for up to 28 days with 1MT or other IDO inhibitors do not appear to develop spontaneous autoimmunity. Together these observations imply that IDO1 is non-essential for self tolerance. In contrast, skin carcinogenesis studies reveal that IDO1-deficient mice are resistant to cancer initiation and carcinoma progression, due to an apparent inability to develop tumor tolerance.

Homology

Human IDO1 has 62% identity (77% similarity) with mouse IDO1 and 44% identity (64% similarity) with mouse IDO2. Human IDO1 has 44% identity (63% similarity) with human IDO2 and mouse IDO1 has 44% identity (64% similarity) with mouse IDO2.

Implicated in

Entity name
Cancer
Note
IDO1 is observed to be highly expressed in many human cancer at the level of the tumor and/or the tumor-draining lymph node. Elevated tryptophan catabolism in the urine and blood of tumor-bearing patients has been recognized for many decades, perhaps explained by the discovery of common IDO1 overexpression in tumors.
Entity name
Leukemia
Note
Patients with acute myeloid leukemia (AML) exhibit an increased ratio of Kyn/Trp in the serum and patients with higher Kyn/Trp ratios display a dramatically reduced survival. In adult T-cell leukemia/lymphoma (ATLL) that is caused by HTLV-1 infection, the serum kynurenine concentrations, Kyn/Trp ratio, and level of IDO mRNA expression are all significantly increased relative to healthy subjects. Interestingly, after chemotherapy, serum kynurenine concentrations are significantly reduced and tryptophan concentrations are significantly increased.
Entity name
Breast cancer
Note
IDO1 expression has been reported in all breast cancer and non-cancer specimens as determined by semiquantitative RT-PCR, with higher levels observed in cancer specimens compared to non-cancer specimens. In this malignancy IDO1 has not been found to correlate to histologic classification, tumor size, lymph nodes metastasis, and survival rate after surgery. However, its expression has been reported to correlate to clinical stage and the serum level of immunosuppressive acidic protein (IAP) in breast cancer patient. In MMTV-Neu transgenic mice, an established mouse model of breast cancer, the IDO1 inhibitor 1MT slows tumor growth but does not arrest it. In contrast, 1MT cooperates strongly with paclitaxel, cisplatin, cyclophosphamide, or doxyrubicin (all widely used in breast cancer treatment) to trigger regression of established tumors that are otherwise refractory to single-agent therapy.
Entity name
Lung cancer
Note
IDO1 expression has been reported to be higher in cases of lung cancer and autologous non-malignant lung tissues than in lung cancer cell lines by quantitative real-time RT-PCR. No significant correlations between IDO1 expression and clinicopathological parameters have been observed. In human non-small-cell lung cancer (NSCLC), immunohistochemical analysis suggests that IDO1 is expressed not by tumor cells but by eosinophilic granulocytes. IDO1 protein in NSCLC is enzymatically active, implying that IDO-positive eosinophils may be competent to exert local immunosuppression. A significant relationship is found between the amount of IDO1-positive infiltrate and overall survival by follow-up analysis of lung cancer patients.
Entity name
Skin cancer
Note
In the classical two-stage mouse model of skin carcinogenesis, phorbol myristate acetate (PMA) induces plasmacytoid dendritic cells (pDCs) in local draining lymph nodes to express IDO1, which confers suppressor activity to the pDCs. Significantly, IDO1-deficient mice display a tumor-resistant phenotype in this model of carcinogenesis.
Entity name
Colon cancer
Note
IDO1 expression in human colon carcinoma cell lines dependent on IFN-gamma induction. Immunohistochemical analysis of colon tumors indicated that IDO1 overexpression is associated with a significant reduction of CD3+ infiltrating T cells and higher occurrence of liver metastases in colorectal cancer patients. Conversely, no correlation was seen with tumor stage, tumor size, histologic grade, nodal status, gender, or age.
Entity name
Pancreatic ductal adenocarcinoma (PDA)
Note
IDO1 is upregulated in metastatic PDA cells and associated with an increased number of FoxP3+ T regulatory cells (Tregs) in tumors. No correlation of IDO1 expression is observed with tumor histologic grade in PDA. In contrast, while non-metastatic PDAs are negative or only focally positive for IDO1, higher and broader expression of IDO1 is seen in both primary and metastatic tumors in patients with lymph node metastases (with stronger staining in metastatic foci).
Entity name
Liver cancer
Note
In human hepatocarcinomas, immunohistochemical analysis revealed that IDO1 was strongly expressed in 36% of cases and weakly expressed in 64% of cases examined. In this study, IDO1 overexpression was significantly correlated with high rates of metastasis and poor prognosis.
Entity name
Ovarian cancer
Note
IDO1 was found to be overexpressed in serous-type ovarian cancer where it was associated with decreased patient survival. IDO1 overexpression was also associated with resistance to paclitaxel.
Entity name
Renal cell carcinoma
Note
Elevated levels of IDO1 mRNA were detected in >75% of clear cell type renal carcinoma, compared to normal kidney. In this study, IDO1 expression was associated with vascular cells in tumors and it correlated with improved long-term survival.
Entity name
Cervical cancer
Note
IDO1 is expressed in cervical intraepithelial neoplasia (CIN) and invasive cervical cancer. Immunohistochemical analysis suggests IDO1 expression in antigen-presenting cells in both primary and invasive lesions. FoxP3+CD4+CD25+ Tregs appear in CIN and are increased in invasive cancer. No significant differences were observed in the proportion of Tregs in the stroma or epithelium (or between metastatic and non-metastatic cancers), but there was a significant increase in Tregs associated with IDO1 overexrpression in metastatic lymph nodes as compared to non-metastatic lymph modes.
Entity name
Endometrial cancer
Note
High expression of IDO1 correlated with a reduced number of tumor-infiltrating lymphocytes (TILs) and natural killer (NK) cells in endometrial cancer. IDO1 overexpression was also positively correlated with myometrial invasion, nodal metastasis, and lymph-vascular space involvement, all of which contribute to disease progression and lower progression-free survival.
Entity name
Uveal melanoma
Note
Primary uveal melanoma from tumor-bearing eyes and metastatic uveal melanoma from liver were not found to express IDO1 in situ. Also, IDO1 was not expressed in either primary or metastatic uveal melanoma cell lines unless they were stimulated by IFN-gamma. Addition of 1MT to IFN-gamma-treated uveal melanoma cell lines significantly diminished kynurenine levels. Together these findings suggested that in settings of IFN-gamma expression IDO1 upregulation may promote escape from T cell-mediated immune surveilance in uveal melanoma.
Entity name
Inflammatory bowel disease (IBD)
Note
IDO1 mRNA is markedly induced in lesional colonic biopsies of IBD patients, being primarily expressed in CD123(+) mononuclear cells that infiltrate the submucosal areas of inflamed lesions. In Crohns disease (CD), IDO1 is also strongly expressed in perifollicular regions of lymphoid follicles, with increased kynurenine and Kyn/Trp ratioes in colonic explant cultures (CECs) from CD patients. Immunohistochemical analysis of colonic biopsies taken from CD patients prior and after treatment with the TNF-blocking antibody infliximab caused a reduction in IDO1 expression in patients with good clinical response to infliximab, consistent with a potential benefit to IDO1 reduction in this disease.
Entity name
Primary biliary cirrhosis (PBL)
Note
PBL is a chronic autoimmune cholestatic liver disease characterized by inflammatory destruction of the small bile ducts within the liver that eventually leads to cirrhosis. One study found a defective Treg compartment and an impaired IDO1 induction by IFN-gamma in peripheral monocytes isolated from patients with PBL.
Entity name
HIV infection
Note
Infection of HIV or Simian immunodeficiency virus (SIV) increases IDO1 expression and functional IDO enzymatic activity both in vitro and in vivo. It is reported that patients infected with HIV have chronically reduced levels of plasma tryptophan and increased levels of kynurenine, suggesting the possibility of IDO1 activation. IDO1-expressing cells may protect HIV from clearance by allowing virally infected cells to become resistant to attack by T cell, or indirectly by promoting induction of acquired, antigen-specific tolerance to HIV antigens.
Entity name
Depression
Note
Evidence exists of a link between IDO activity and mood. In serotonergic nerve terminals tryptophan is hydroxylated before conversion to serotonin (5HT). Lower levels of serotonin in the brain are associated with depressed mood. Tryptophan availability limits de novo synthesis of serotonin and tryptophan depletion has been associated with depressive symptoms in patients with remitted major depressive disorder, resulting in a disturbance of mood in subjects with a family history of affective illness.
Given the proposed role of IDO in maintaining pregnancy, the linkage between IDO activity and mood may be relevant to postpartum depression. Typically this phenomenon occurs within a few days after delivery until the tenth day postpartum. An association has been noted between Kyn/Trp ratio and the severity of depressive symptoms in the early puerperium, suggesting that an increased degradation of typtophan relates to the occurrence of postpartum blues. Conversely, a decrease in Kyn/Trp ratioes has been reported in women with stable mood after delivery.
Some evidence exists that inflammatory changes in the brain that may be associated with IDO1 expression are pathological features of both depression and dementia. Pathological changes have been associated with a reduction in the neuroprotective components of the kynurenine pathway (e.g. kynurenic acid) and an increase in the neurodegenerative components (e.g. 3-hydroxykynurenine acid and quinolinic acid). These changes are postulated to cause neuronal damage and predispose chronically depressed patients to dementia. In Alzheimers patients, plasma Kyn/Trp ratioes have been observed to correlate with the degree of cognitive deficit. Also, immunohistochemical analysis suggests that IDO1 is abundant in the brains of Alzheimers patients compared to controls. Similarly, relative elevations in Kyn/Trp ratio have been found in plasma from patients with Huntingtons or Parkinsons disease compared to controls. Notably, depressive symptoms affect up to 50% of Alzheimers patients, 41% of Huntingtons patients, and 40% of Parkinsons patients.
Further support for a link between IDO1 elevation and depressed mood are found in patients with autoimmune diseases, where symptoms have been associated with increased tryptophan catabolism. Enhanced tryptophan degradation was found in systemic lupus erythromatosus, rheumatoid arthritis, sarcoidosis, and a mouse model of multiple sclerosis. It has also been noted that a higher proportion of patients infected with Hepatitis C virus (HCV) have lower serum tryptophan concentrations and depression relative to healthy volunteers.
Entity name
Defense against mycoplasm infection
Note
IDO1 has been implicated in host defence against certain pathogens such as Chlamydia pneumoniae, Toxoplasma gondii, group B streptococci, and mycobacteria through its ability to deplete tryptophan and thereby inhibit pathogen replication. IDO1 has also been observed to inhibit the replication of cytomegalovirus and herpes simplex virus in vitro.

Bibliography

Pubmed IDLast YearTitleAuthors
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168880012006Cyclooxygenase-2 inhibitor enhances the efficacy of a breast cancer vaccine: role of IDO.Basu GD et al
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186607002008Clinical relevance of indoleamine 2,3-dioxygenase for alloimmunity and transplantation.Brandacher G et al
159470912005A two-step induction of indoleamine 2,3 dioxygenase (IDO) activity during dendritic-cell maturation.Braun D et al
183704102008The role of serine 167 in human indoleamine 2,3-dioxygenase: a comparison with tryptophan 2,3-dioxygenase.Chauhan N et al
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161350112005Reduced uterine indoleamine 2,3-dioxygenase versus increased Th1/Th2 cytokine ratios as a basis for occult and clinical pregnancy failure in mice and humans.Clark DA et al
168424432006Low serum tryptophan levels, reduced macrophage IDO activity and high frequency of psychopathology in HCV patients.Cozzi A et al
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171707282007Acute myeloid leukemia cells constitutively express the immunoregulatory enzyme indoleamine 2,3-dioxygenase.Curti A et al
145229332003CD4(+)CD25(+) regulatory lymphocytes require interleukin 10 to interrupt colon carcinogenesis in mice.Erdman SE et al
158997882005CD4+CD25+ regulatory lymphocytes induce regression of intestinal tumors in ApcMin/+ mice.Erdman SE et al
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170389132006Rabbit antithymocyte globulin inhibits monocyte-derived dendritic cells maturation in vitro and polarizes monocyte-derived dendritic cells towards tolerogenic dendritic cells expressing indoleamine 2,3-dioxygenase.Gillet-Hladky S et al
129634902003Inhibition of indoleamine 2,3-dioxygenase activity in IFN-gamma stimulated astroglioma cells decreases intracellular NAD levels.Grant R et al
182058042008Antimicrobial and immunoregulatory effects mediated by human lung cells: role of IFN-gamma-induced tryptophan degradation.Heseler K et al
163191392005Heme oxygenase-1 inhibits rat and human breast cancer cell proliferation: mutual cross inhibition with indoleamine 2,3-dioxygenase.Hill M et al
186393412009Indoleamine 2,3-dioxygenase is highly expressed in human adult T-cell leukemia/lymphoma and chemotherapy changes tryptophan catabolism in serum and reduced activity.Hoshi M et al
151027812004Nitric oxide-mediated regulation of gamma interferon-induced bacteriostasis: inhibition and degradation of human indoleamine 2,3-dioxygenase.Hucke C et al
148712942004Indoleamine 2,3-dioxygenase is necessary for cytolytic activity of natural killer cells.Kai S et al
174301162007IDO and clinical conditions associated with depressive symptoms.Kohl C et al
150708792004Mechanisms regulating the expression of indoleamine 2,3-dioxygenase during decidualization of human endometrium.Kudo Y et al
172296982007Upregulation of indoleamine 2,3-dioxygenase in hepatitis C virus infection.Larrea E et al
171828912007Upregulation of placental indoleamine 2,3-dioxygenase by human chorionic gonadotropin.Lei ZM et al
149697662004Cell surface expression of MHC class I antigen is suppressed in indoleamine 2,3-dioxygenase genetically modified keratinocytes: implications in allogeneic skin substitute engraftment.Li Y et al
159500642005Localisation of indoleamine 2,3-dioxygenase and kynurenine hydroxylase in the human placenta and decidua: implications for role of the kynurenine pathway in pregnancy.Ligam P et al
127661582003Asp274 and his346 are essential for heme binding and catalytic function of human indoleamine 2,3-dioxygenase.Littlejohn TK et al
177115492007Nonviral gene delivery with indoleamine 2,3-dioxygenase targeting pulmonary endothelium protects against ischemia-reperfusion injury.Liu H et al
173180802007Are indoleamine-2,3-dioxygenase producing human dendritic cells a tool for suppression of allogeneic T-cell responses?Löb S et al
180459702008Levo- but not dextro-1-methyl tryptophan abrogates the IDO activity of human dendritic cells.Lob S et al
182993242008Cytochrome b5, not superoxide anion radical, is a major reductant of indoleamine 2,3-dioxygenase in human cells.Maghzal GJ et al
172023792007IL-8 and IDO expression by human gingival fibroblasts via TLRs.Mahanonda R et al
187769402008HIV-activated human plasmacytoid DCs induce Tregs through an indoleamine 2,3-dioxygenase-dependent mechanism.Manches O et al
180366452008Sputum indoleamine-2, 3-dioxygenase activity is increased in asthmatic airways by using inhaled corticosteroids.Maneechotesuwan K et al
150014722004Human bone marrow stromal cells inhibit allogeneic T-cell responses by indoleamine 2,3-dioxygenase-mediated tryptophan degradation.Meisel R et al
129024622003Cutting edge: induced indoleamine 2,3 dioxygenase expression in dendritic cell subsets suppresses T cell clonal expansion.Mellor AL et al
154596682004IDO expression by dendritic cells: tolerance and tryptophan catabolism.Mellor AL et al
164212202005IDO expression on decidual and peripheral blood dendritic cells and monocytes/macrophages after treatment with CTLA-4 or interferon-gamma increase in normal pregnancy but decrease in spontaneous abortion.Miwa N et al
157115572005Inhibition of indoleamine 2,3-dioxygenase, an immunoregulatory target of the cancer suppression gene Bin1, potentiates cancer chemotherapy.Muller AJ et al
161662762005Marrying immunotherapy with chemotherapy: why say IDO?Muller AJ et al
168621922006Targeting the mechanisms of tumoral immune tolerance with small-molecule inhibitors.Muller AJ et al
174763442007Indoleamine 2,3-dioxygenase and tumor-induced tolerance.Munn DH et al
152545952004Expression of indoleamine 2,3-dioxygenase by plasmacytoid dendritic cells in tumor-draining lymph nodes.Munn DH et al
174330372007Expression of indoleamine 2, 3-dioxygenase and the recruitment of Foxp3-expressing regulatory T cells in the development and progression of uterine cervical cancer.Nakamura T et al
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172946092007A putative mechanism on remission of multiple sclerosis during pregnancy: estrogen-induced indoleamine 2,3-dioxygenase by dendritic cells.Zhu WH et al
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124711392002IFN-gamma amplifies IL-6 and IL-8 responses by airway epithelial-like cells via indoleamine 2,3-dioxygenase.van Wissen M et al
152454292004Human epidermal langerhans cells express the immunoregulatory enzyme indoleamine 2,3-dioxygenase.von Bubnoff D et al
173215962007Indoleamine-dioxygenase is expressed in human decidua at the time maternal tolerance is established.von Rango U et al

Other Information

Locus ID:

NCBI: 3620
MIM: 147435
HGNC: 6059
Ensembl: ENSG00000131203

Variants:

dbSNP: 3620
ClinVar: 3620
TCGA: ENSG00000131203
COSMIC: IDO1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000131203ENST00000253513J3KN03
ENSG00000131203ENST00000518237P14902
ENSG00000131203ENST00000518237A0A348GSI3
ENSG00000131203ENST00000518804E5RIX2
ENSG00000131203ENST00000519154A0A140T9Z2
ENSG00000131203ENST00000522495P14902
ENSG00000131203ENST00000522495A0A348GSI3
ENSG00000131203ENST00000522840E5RH36

Expression (GTEx)

0
5
10
15
20

Pathways

PathwaySourceExternal ID
Tryptophan metabolismKEGGko00380
Tryptophan metabolismKEGGhsa00380
Metabolic pathwaysKEGGhsa01100
African trypanosomiasisKEGGko05143
African trypanosomiasisKEGGhsa05143
MetabolismREACTOMER-HSA-1430728
Metabolism of amino acids and derivativesREACTOMER-HSA-71291
Tryptophan catabolismREACTOMER-HSA-71240
Histidine, lysine, phenylalanine, tyrosine, proline and tryptophan catabolismREACTOMER-HSA-6788656

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA164779048interferon alfa-2a, recombinantChemicalClinicalAnnotationassociatedPD
PA164784024peginterferon alfa-2bChemicalClinicalAnnotationassociatedPD
PA446863Hepatitis C, ChronicDiseaseClinicalAnnotationassociatedPD

References

Pubmed IDYearTitleCitations
145022822003Evidence for a tumoral immune resistance mechanism based on tryptophan degradation by indoleamine 2,3-dioxygenase.589
239864002013Up-regulation of PD-L1, IDO, and T(regs) in the melanoma tumor microenvironment is driven by CD8(+) T cells.495
150014722004Human bone marrow stromal cells inhibit allogeneic T-cell responses by indoleamine 2,3-dioxygenase-mediated tryptophan degradation.468
179515262008Mesenchymal stem cells inhibit natural killer-cell proliferation, cytotoxicity, and cytokine production: role of indoleamine 2,3-dioxygenase and prostaglandin E2.302
157115572005Inhibition of indoleamine 2,3-dioxygenase, an immunoregulatory target of the cancer suppression gene Bin1, potentiates cancer chemotherapy.290
152545952004Expression of indoleamine 2,3-dioxygenase by plasmacytoid dendritic cells in tumor-draining lymph nodes.254
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Citation

Mee Young Chang ; Alexander J Muller ; George C Prendergast

IDO1 (indoleamine 2,3-dioxygenase 1)

Atlas Genet Cytogenet Oncol Haematol. 2009-03-01

Online version: http://atlasgeneticsoncology.org/gene/40973/ido1