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IGF1R (insulin-like growth factor 1 receptor)

Identity

Other namesCD221
IGFIR
JTK13
MGC142170
MGC142172
MGC18216
HGNC (Hugo) IGF1R
Location 15q26.3
Location_base_pair Starts at 97010284 and ends at 97325282 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Description The IGF1R gene contains 21 exons spanning approximately 100-kb of genomic DNA.
Transcription The IGF1R mRNA is a 11242-base, single-stranded linear molecule. Various hormones and growth factors were shown to regulate IGF1R gene transcription. Specifically, growth factors and oncogenic agents associated with positive stimulation of cell division were shown to upregulate IGF1R gene expression whereas negative modulators of cell growth (e.g., tumor suppressors) usually cause a reduction in IGF1R gene expression. Growth factors that stimulate IGF1R gene transcription include, among others, basic fibroblast growth factor (bFGF) and platelet-derived growth factor (PDGF). In addition, IGF1R gene expression is regulated by steroid hormones. Thus, estradiol was shown to increase, while progesterone decreased, IGF1R mRNA levels in breast cancer cells.

Protein

Description The IGF1R is a cell-surface tyrosine kinase receptor that is synthesized as a single polypeptide chain which is then processed to yield an around 180-kDa glycopeptide. The length of the IGF1R precursor is 1367 amino acids. Precursor chains include a 30-amino acid leader peptide rich in hydrophobic residues, which is involved in the transfer of the nascent protein into the endoplasmic reticulum. Partially processed proreceptors form disulfide-linked dimers that are subsequently glycosylated and proteolytically cleaved at a basic tetrapeptide sequence to yield mature α and ® subunits. The mature heterotetramers have a β-α-α-β conformation.
The α subunit is entirely extracellular and includes a cysteine-rich region and several potential N-linked glycosylation sites (Asn-X-Ser/Thr motifs). The cysteine-rich domain of the IGF1R is important for high-affinity IGF1 binding. The ® subunit features a unique hydrophobic sequence that constitutes the transmembrane domain. The cytoplasmic portion of the ® subunit contains a tyrosine kinase enzymatic domain. Inside this catalytic region there is a glycine-rich conserved element that participates in the transfer of the phosphate moiety of ATP to specific substrates.
Expression The IGF1R is abundantly expressed in the embryo, with significant reduction in expression levels at adult stages.
Localisation The IGF1R is essentially expressed by most organs and tissues. Very high levels are detected in brain. Extremely low levels are seen in liver, due to downregulation by hepatic IGF1.
Function The IGF1R is involved in growth, development, and differentiation processes. The IGF1R displays a very strong antiapoptotic activity and protects IGF1R-expressing cells from programmed cell death.
IGF1R is vital for cell survival, as illustrated by the lethal phenotype of mice in which the IGF1R gene was disrupted by homologous recombination. During normal ontogenesis, the IGF1R is expressed at every developmental period, including the oocyte stage. Late embryonic and adult stages, in which the percentage of rapidly proliferating cells declines, are associated with an overall reduction in IGF1R mRNA levels.
IGF1R is involved in normal growth, development, and differentiation processes. IGF1R mediates the biological roles of both the IGF1 and IGF2 ligands. IGF1R binds IGF1 and IGF2 with high affinity, and insulin with significantly reduced affinity. IGF1R displays a very potent antiapoptotic activity, protecting IGF1R-expressing cells from programed cell death. Activation of the IGF1R by locally-produced or circulating IGF1 or IGF2 leads to autophosphorylation of the tyrosine kinase domain, with ensuing activation of the Ras-Raf-MAP kinase and PI3K-PKB/Akt signaling pathways. Activation of these cytoplasmic mediators is critical in order for the IGF1R to exert its mitogenic and antiapoptotic activities.
The biological actions of the IGF1R are modulated by a family of IGF-binding proteins (IGFBPs) that includes at least six members (IGFBP1, IGFBP2, IGFBP3, IGFBP4, IGFBP5, IGFBP6). IGFBPs control IGF1R action by regulating the bioavailability of the IGF1 and IGF2 ligands. The affinity of the IGFBPs for the ligands is 1-2 orders of magnitude higher than the affinity exhibited by the receptor. IGFBPs usually display inhibitory types of activities however, under certain circumstances, IGFBPs may also stimulate IGF1 action.

Mutations

Note IGF1R mutations are very rare, suggesting that homozygous mutations are a lethal condition. Recently, IGF1R mutations were described in two cohorts of children. The first cohort consisted of children with unexplained intrauterine growth restriction and subsequent short stature, and the second group included children with short stature and high circulating IGF1 levels. A compound heterozygote for point mutations in IGF1R exon 2 was identified in a girl from the first group. Fibroblasts cultured from the patient had decreased IGF1R binding and IGF1-stimulated phosphorylation. In the second cohort a boy was identified with a nonsense mutation, leading to reduced IGF1R expression.
In a family harboring a ring chromosome 15, hemizygotes for the IGF1R locus showed severe growth failure, while a patient possessing two copies of the gene had borderline stature. On the other hand, a patient with three IGF1R gene copies due to a partial duplication of the long arm of chromosome 15, presented with height and weight above the 97th percentile and showed accelerated cellular growth.

Implicated in

Entity Various tumors
Note Clinical and experimental data collected over the past 25 years have suggested that the IGF1R gene exhibits a pattern of expression in malignant cells that reflects its pro-survival role. Using a variety of techniques, including IGF binding and radio-receptor assays, Northern and Western blottings, and immunohistochemical and in situ hybridization analyses, most studies consistently showed that the IGF1R is expressed at high levels in primary tumors and cancer-derived cells. These tumors include, among others, breast, prostate, ovarian, colon, hematopoietic, rhabdomyosarcoma, and renal cancers. These augmented IGF1R levels reflect a reversal to more primitive, less differentiated, ontogenetic stages that, in most species and body organs, are characterized by very high concentrations of IGF1R mRNA and IGF binding sites. Whereas the molecular mechanisms that lead to increased IGF1R gene expression in cancer remain largely unexplained, the dogma that emerged postulated that IGF1R expression is a fundamental prerequisite for cellular transformation. The appeal of this paradigm resides in the fact that enhanced IGF1R levels and IGF1 signaling are considered key factors, indispensable for the cell, in order to adopt proliferative/oncogenic pathways.
Anti-IGF1R strategies (e.g., humanized IGF1R antibodies, low molecular weight tyrosine kinase inhibitors, etc.) are currently being developed in order to target the IGF1R as a clinically relevant therapeutic target.
  

External links

Nomenclature
HGNC (Hugo)IGF1R   5465
Entrez_Gene (NCBI)IGF1R  3480  insulin-like growth factor 1 receptor
Cards
AtlasIGF1RID40928ch15q26
GeneCards (Weizmann)IGF1R
Ensembl (Hinxton)ENSG00000140443 [Gene_View]  IGF1R [Vega]
AceView (NCBI)IGF1R
Genatlas (Paris)IGF1R
euGene (Indiana)3480
SOURCE (Stanford)NM_000875
Gene Expression (Array Express) ENSG00000140443
Genomic and cartography
GoldenPath (UCSC)IGF1R  -  15q26.3   chr15:97010284-97325282 +  15q26.3   [Description]    (hg18-Mar_2006)
EnsemblIGF1R - 15q26.3 [CytoView]
Mapping of homologs : NCBIIGF1R [Mapview]
OMIM147370   270450   
Gene and transcription
Gene : Genbank (Entrez)AB425196 AF020763 AK310188 AY429545 BC010607
Reference sequence (RefSeq transcript) :SRSNM_000875
Reference transcript : EntrezNM_000875
RefSeq genomic : SRSAC_000058 AC_000147 NC_000015 NG_009492 NT_010274 NW_001838224 NW_925940
RefSeq genomic : EntrezAC_000058 AC_000147 NC_000015 NG_009492 NT_010274 NW_001838224 NW_925940
Consensus coding sequences : CCDS NCBIIGF1R
Cluster EST : UnigeneHs.714012 [ SRS ] Hs.714012 [ NCBI ]
Alternative Splicing : Fast-db (Paris)10749
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP08069 (SRS) P08069 (Expasy) P08069 (Uniprot)
With graphics : InterProP08069
Splice isoforms : VarSplice FASTAP08069(VarSplice FASTA)
Domaine pattern : Prosite (SRS)FN3 (PS50853)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_TYR (PS00109)    RECEPTOR_TYR_KIN_II (PS00239)   
Domain pattern : Prosite (Expaxy)FN3 (PS50853)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_TYR (PS00109)    RECEPTOR_TYR_KIN_II (PS00239)   
Domains : Interpro (SRS)EGF_rcpt_L    Fibronectin_typ-III-like_fold    FN_III    Furin-like_Cys-rich_dom    Furin_repeat    Growth_fac_rcpt    Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Tyr_kinase_insulin-like_rcpt    Tyr_kinase_insulin_GF_rcpt    Tyr_prot_kinase    Tyr_prot_kinase_AS    Tyr_prot_kinase_cat_dom    Tyr_prot_kinase_rcpt_2_CS    Tyr_prot_kinase_subgr_cat_dom   
Domains : Interpro (EBI)EGF_rcpt_L    Fibronectin_typ-III-like_fold    FN_III    Furin-like_Cys-rich_dom    Furin_repeat    Growth_fac_rcpt    Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Tyr_kinase_insulin-like_rcpt    Tyr_kinase_insulin_GF_rcpt    Tyr_prot_kinase    Tyr_prot_kinase_AS    Tyr_prot_kinase_cat_dom    Tyr_prot_kinase_rcpt_2_CS    Tyr_prot_kinase_subgr_cat_dom   
Related proteins : CluSTrP08069
Domain families : Pfam SRSfn3 (PF00041)    Furin-like (PF00757)    Pkinase_Tyr (PF07714)    Recep_L_domain (PF01030)   
Domain families : Pfam Sangerfn3 (PF00041)    Furin-like (PF00757)    Pkinase_Tyr (PF07714)    Recep_L_domain (PF01030)   
Domain families : Pfam NCBIpfam00041    pfam00757    pfam07714    pfam01030   
Domain families : Smart EMBLFN3 (SM00060)  FU (SM00261)  TyrKc (SM00219)  
Blocks (Seattle)P08069
Crystal structure of protein : PDB SRS1IGR    1JQH    1K3A    1M7N    1P4O    2OJ9    2ZM3    3D94    3F5P   
Crystal structure of protein : PDBSum1IGR    1JQH    1K3A    1M7N    1P4O    2OJ9    2ZM3    3D94    3F5P   
Crystal structure of protein : IMB1IGR    1JQH    1K3A    1M7N    1P4O    2OJ9    2ZM3    3D94    3F5P   
Crystal structure of protein : PDB RSDB1IGR    1JQH    1K3A    1M7N    1P4O    2OJ9    2ZM3    3D94    3F5P   
HPRD00932
Protein Interaction databases
DIP (DOE-UCLA)P08069
IntAct (EBI)P08069
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIIGF1R
SNP : GeneSNP UtahIGF1R
SNP : HGBaseIGF1R
Genetic variants : HAPMAPIGF1R
Somatic Mutations in Cancer : COSMICIGF1R 
Mutations and Diseases : HGMDIGF1R
Hereditary diseases : OMIM147370    270450   
Hereditary diseases : GENETests147370    270450   
Diseases : Genetic AssociationIGF1R
General knowledge
Homologs : HomoloGeneIGF1R
Homology/Alignments : Family Browser UCSCIGF1R
Phylogenetic Trees/Animal Genes : TreeFamIGF1R
Catalytic activity : Enzyme2.7.10.1 [ Enzyme-Expasy ]   2.7.10.1 [ Enzyme-SRS ]   2.7.10.1 [ IntEnz-EBI ]   2.7.10.1 [ BRENDA ]   2.7.10.1 [ KEGG ]   
Chemical/Protein Interactions : CTD3480
Keywords Ontology : AmiGOnucleotide binding  receptor activity  insulin-like growth factor receptor activity  insulin receptor binding  ATP binding  microsome  integral to plasma membrane  anti-apoptosis  immune response  signal transduction  axonogenesis  brain development  positive regulation of cell proliferation  insulin receptor signaling pathway  organ morphogenesis  phosphoinositide 3-kinase cascade  membrane  transferase activity  establishment of cell polarity  manganese ion binding  male sex determination  positive regulation of cell migration  mammary gland development  neuron projection development  insulin-like growth factor I binding  identical protein binding  neuron projection  phosphoinositide 3-kinase binding  insulin binding  insulin receptor substrate binding  positive regulation of DNA replication  protein amino acid autophosphorylation  metal ion binding  insulin-like growth factor receptor signaling pathway  phosphoinositide-mediated signaling  protein tetramerization  protein heterooligomerization  
Keywords Ontology : EGO-EBInucleotide binding  receptor activity  insulin-like growth factor receptor activity  insulin receptor binding  ATP binding  microsome  integral to plasma membrane  anti-apoptosis  immune response  signal transduction  axonogenesis  brain development  positive regulation of cell proliferation  insulin receptor signaling pathway  organ morphogenesis  phosphoinositide 3-kinase cascade  membrane  transferase activity  establishment of cell polarity  manganese ion binding  male sex determination  positive regulation of cell migration  mammary gland development  neuron projection development  insulin-like growth factor I binding  identical protein binding  neuron projection  phosphoinositide 3-kinase binding  insulin binding  insulin receptor substrate binding  positive regulation of DNA replication  protein amino acid autophosphorylation  metal ion binding  insulin-like growth factor receptor signaling pathway  phosphoinositide-mediated signaling  protein tetramerization  protein heterooligomerization  
Pathways : BIOCARTARegulation of BAD phosphorylation [Genes]    Erk1/Erk2 Mapk Signaling pathway [Genes]    Control of skeletal myogenesis by HDAC & calcium/calmodulin-dependent kinase (CaMK) [Genes]    IGF-1 Signaling Pathway [Genes]    Skeletal muscle hypertrophy is regulated via AKT/mTOR pathway [Genes]    Multiple antiapoptotic pathways from IGF-1R signaling lead to BAD phosphorylation [Genes]    The IGF-1 Receptor and Longevity [Genes]    Telomeres, Telomerase, Cellular Aging, and Immortality [Genes]   
Pathways : KEGGFocal adhesionAdherens junctionLong-term depressionColorectal cancer
Other databases
Probes
Probes : ImagenesIGF1R Related clones (RZPD - Berlin)
Literature
PubMed340 Pubmed reference(s) in Entrez
PubGeneIGF1R

Bibliography

Role of insulin-like growth factors in embryonic and postnatal growth.
Baker J, Liu JP, Robertson EJ, Efstratiadis A.
Cell. 1993 Oct 8;75(1):73-82.
PMID 8402902
 
Platelet-derived growth factor increases the activity of the promoter of the insulin-like growth factor-1 (IGF-1) receptor gene.
Rubini M, Werner H, Gandini E, Roberts CT Jr, LeRoith D, Baserga R.
Exp Cell Res. 1994 Apr;211(2):374-9.
PMID 8143786
 
Hemizygosity at the insulin-like growth factor I receptor (IGF1R) locus and growth failure in the ring chromosome 15 syndrome.
Peoples R, Milatovich A, Francke U.
Cytogenet Cell Genet. 1995;70(3-4):228-34.
PMID 7789178
 
The role of the insulin-like growth factor system in human cancer.
Werner H, LeRoith D.
Adv Cancer Res. 1996;68:183-223. (REVIEW)
PMID 8712068
 
Type I insulin-like growth factor receptor gene expression in normal human breast tissue treated with oestrogen and progesterone.
Clarke RB, Howell A, Anderson E.
Br J Cancer. 1997;75(2):251-7.
PMID 9010034
 
Differential regulation of insulin-like growth factor-I (IGF-I) receptor gene expression by IGF-I and basic fibroblastic growth factor.
Hernandez-Sanchez C, Werner H, Roberts CT Jr, Woo EJ, Hum DW, Rosenthal SM, LeRoith D.
J Biol Chem. 1997 Feb 21;272(8):4663-70.
PMID 9030517
 
IGF-I receptor mutations resulting in intrauterine and postnatal growth retardation.
Abuzzahab MJ, Schneider A, Goddard A, Grigorescu F, Lautier C, Keller E, Kiess W, Klammt J, Kratzsch J, Osgood D, Pfaffle R, Raile K, Seidel B, Smith RJ, Chernausek SD; Intrauterine Growth Retardation (IUGR) Study Group.
N Engl J Med. 2003 Dec 4;349(23):2211-22.
PMID 14657428
 
Cell proliferation activities on skin fibroblasts from a short child with absence of one copy of the type 1 insulin-like growth factor receptor (IGF1R) gene and a tall child with three copies of the IGF1R gene.
Okubo Y, Siddle K, Firth H, O'Rahilly S, Wilson LC, Willatt L, Fukushima T, Takahashi S, Petry CJ, Saukkonen T, Stanhope R, Dunger DB.
J Clin Endocrinol Metab. 2003 Dec;88(12):5981-8.
PMID 14671200
 
IGF, IGF receptor and overgrowth syndromes.
Bentov I, Werner H.
Pediatr Endocrinol Rev. 2004 Jun;1(4):352-60. (REVIEW)
PMID 16437028
 
The insulin-like growth factor-I receptor gene: a downstream target for oncogene and tumor suppressor action.
Werner H, Maor S.
Trends Endocrinol Metab. 2006 Aug;17(6):236-42.
PMID 16815029
 
IGF signaling defects as causes of growth failure and IUGR.
Klammt J, Pfaffle R, Werner H, Kiess W.
Trends Endocrinol Metab. 2008 Aug;19(6):197-205.
PMID 18515143
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2008Itay Bentov, Haim Werner
Department of Human Molecular Genetics and Biochemistry, Sackler School of Medecine, Tel Aviv University,Tel Aviv 69978, ISRAEL

Citation

This paper should be referenced as such :
Bentov Y, Werner H . IGF1R (insulin-like growth factor 1 receptor). Atlas Genet Cytogenet Oncol Haematol. September 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/IGF1RID40928ch15q26.html

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indexed on : Sat Feb 27 10:52:03 CET 2010

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