Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MAPK9 (mitogen-activated protein kinase 9)

Identity

Other namesJNK2 (C-Jun N-terminal kinase 2)
Stress-activated protein kinase 2 (SAPK2)
HGNC (Hugo) MAPK9
Location 5q35
Location_base_pair Starts at 179605635 and ends at 179651677 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Description The JNK2 gene maps on chromosome 5q35 spanning 58494bp. It contains 17 confirmed introns, 14 of which are alternative.
Transcription By alternative splicing, JNK2 gene encodes 12 types of transcripts that translate to 12 distinct JNK2 isoforms. The molecular weight of JNK2 is about 55 kD.

Protein

Description All JNK proteins contain a protein kinase domain that belong to a very extensive family of eukaryotic serine/threonine proteins kinase. A number of conserved regions have been identified in the catalytic domain of JNKs. In the N-terminal extremity of the catalytic domain there is a glycine-rich motif in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. A conserved aspartic acid reside that is critical for the catalytic activity of kinase has also been identified in the central part of the catalytic domain.
Expression JNK1 is ubiquitously expressed.
Localisation Cytoplasmic and nuclear
Function The members of JNK family act as an integration point for multiple intracellular biochemical signals governing a wide variety of cellular processes such as proliferation, differentiation, apoptosis, migration, transcriptional regulation, and development. JNK targets specific transcription factors and thus mediates immediate-early gene expression in response to various stress signals including ultraviolet (UV) radiation, oxidative stress, protein malfolding in endoplasmic reticulum, osmotical shock, and inflammatory mediators. These transcription factors include AP-1, ATF-2, Elk-1, p53, etc... Several upstream dual specific protein kinases, such as MKK4/SEK1 and MKK7, can activate JNK through phosphorylation of the conversed Thr-Pro-Tyr motif on JNK proteins. In mammalian cells, activated JNK can phosphorylate the N-terminus of c-Jun, which contains both JNK docking site and JNK phosphorylation site (ser63 and ser73), orJunD, which lacks a JNK docking site but contains a JNK phosphorylation site. JNK is unable to phosphorylate JunB due to the lack of a JNK phosphorylation site inJunB, despite there is a functional JNK docking site. Comparison of the binding activity of JNK isoforms demonstrates that JNK2 bind c-Jun approximately 25 times more efficiently than did JNK1. Therefore, individual members of the JNK family may selectively target specific transcription factors in vivo. One of the most important functions of JNK is the regulation of apoptosis. Emerging evidence indicates that JNK activation is obligatory for apoptosis induced by both receptor-mediated ÒextrinsicÓ pathway or mitochondria-mediated ÒintrinsicÓ pathway. JNK activation may contribute to the initiation of Fas-induced apoptosis, possibly through the amplification of autocrine or paracrine Fas signaling by JNK-dependent Fas ligand (FasL) gene expression. In addition, JNK has been indicated in the apoptosis induced by Daxx, a Fas death domain (FADD) interaction protein. Through its serine/threonine kinase activity, JNK may contribute to mitochondria-mediated apoptosis by phosphorylating pro- or anti-apoptoticBcl-2 family proteins. Finally, JNK has also been indicated as an important kinase phosphorylating p53 and subsequently facilitating p53-dependent apoptotic responses. Sustained JNK activation may be responsible for the enhanced apoptosis observed in RelA-/- or Ikkb-/- mouse embryonic fibroblasts treated with TNFa. It was suggested that deficiency of RelA or IKKb caused a decreased expression of XIAP or GADD45b, which may antagonize the activation of JNK activation. However, such speculation contradicts the previous observations indicating that both GADD45b and XIAP are activators, rather than inhibitors for JNK activation. Moreover, gene profiling in our recent studies indicated no substantial difference of basal or inducible GADD45b and XIAP mRNA in wild type cells and Ikkb-/- cells.

Implicated in

Entity Obesity, insulin resistance, neurodegenerative diseases, inflammation, cancer.
  

External links

Nomenclature
HGNC (Hugo)MAPK9   6886
Entrez_Gene (NCBI)MAPK9  5601  mitogen-activated protein kinase 9
Cards
AtlasJNK2ID426
GeneCards (Weizmann)MAPK9
Ensembl (Hinxton)ENSG00000050748 [Gene_View]  MAPK9 [Vega]
AceView (NCBI)MAPK9
Genatlas (Paris)MAPK9
euGene (Indiana)5601
SOURCE (Stanford)NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070
Gene Expression (Array Express) ENSG00000050748
Genomic and cartography
GoldenPath (UCSC)MAPK9  -  5q35   chr5:179605635-179651677 -  5q35   [Description]    (hg18-Mar_2006)
EnsemblMAPK9 - 5q35 [CytoView]
Mapping of homologs : NCBIMAPK9 [Mapview]
OMIM602896   
Gene and transcription
Gene : Genbank (Entrez)AB451302 AB451355 AB451433 AK289638 BC032539
Reference sequence (RefSeq transcript) :SRSNM_001135044 NM_002752 NM_139068 NM_139069 NM_139070
Reference transcript : EntrezNM_001135044 NM_002752 NM_139068 NM_139069 NM_139070
RefSeq genomic : SRSAC_000048 AC_000137 NC_000005 NT_023133 NW_001838967 NW_922818
RefSeq genomic : EntrezAC_000048 AC_000137 NC_000005 NT_023133 NW_001838967 NW_922818
Consensus coding sequences : CCDS NCBIMAPK9
Cluster EST : UnigeneHs.484371 [ SRS ] Hs.484371 [ NCBI ]
Alternative Splicing : Fast-db (Paris)14177
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP45984 (SRS) P45984 (Expasy) P45984 (Uniprot)
With graphics : InterProP45984
Splice isoforms : VarSplice FASTAP45984(VarSplice FASTA)
Domaine pattern : Prosite (SRS)MAPK (PS01351)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domain pattern : Prosite (Expaxy)MAPK (PS01351)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (SRS)JNK_MAPK    Kinase-like_dom    MAP_kinase_CS    Prot_kinase_cat_dom    Se/Thr_prot_kinase-like_dom    Ser/Thr_prot_kinase_AS    Ser/Thr_prot_kinase_dom   
Domains : Interpro (EBI)JNK_MAPK    Kinase-like_dom    MAP_kinase_CS    Prot_kinase_cat_dom    Se/Thr_prot_kinase-like_dom    Ser/Thr_prot_kinase_AS    Ser/Thr_prot_kinase_dom   
Related proteins : CluSTrP45984
Domain families : Pfam SRSPkinase (PF00069)   
Domain families : Pfam SangerPkinase (PF00069)   
Domain families : Pfam NCBIpfam00069   
Domain families : Smart EMBLS_TKc (SM00220)  
Blocks (Seattle)P45984
Crystal structure of protein : PDB SRS3E7O   
Crystal structure of protein : PDBSum3E7O   
Crystal structure of protein : IMB3E7O   
Crystal structure of protein : PDB RSDB3E7O   
HPRD04206
Protein Interaction databases
DIP (DOE-UCLA)P45984
IntAct (EBI)P45984
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIMAPK9
SNP : GeneSNP UtahMAPK9
SNP : HGBaseMAPK9
Genetic variants : HAPMAPMAPK9
Somatic Mutations in Cancer : COSMICMAPK9 
Mutations and Diseases : HGMDMAPK9
Hereditary diseases : OMIM602896   
Hereditary diseases : GENETests602896   
Diseases : Genetic AssociationMAPK9
General knowledge
Homologs : HomoloGeneMAPK9
Homology/Alignments : Family Browser UCSCMAPK9
Phylogenetic Trees/Animal Genes : TreeFamMAPK9
Catalytic activity : Enzyme2.7.11.24 [ Enzyme-Expasy ]   2.7.11.24 [ Enzyme-SRS ]   2.7.11.24 [ IntEnz-EBI ]   2.7.11.24 [ BRENDA ]   2.7.11.24 [ KEGG ]   
Chemical/Protein Interactions : CTD5601
Keywords Ontology : AmiGOnucleotide binding  protein serine/threonine kinase activity  JUN kinase activity  MAP kinase activity  protein binding  ATP binding  protein amino acid phosphorylation  response to stress  JNK cascade  positive regulation of gene expression  positive regulation of macrophage derived foam cell differentiation  transferase activity  induction of apoptosis in response to chemical stimulus  response to cadmium ion  
Keywords Ontology : EGO-EBInucleotide binding  protein serine/threonine kinase activity  JUN kinase activity  MAP kinase activity  protein binding  ATP binding  protein amino acid phosphorylation  response to stress  JNK cascade  positive regulation of gene expression  positive regulation of macrophage derived foam cell differentiation  transferase activity  induction of apoptosis in response to chemical stimulus  response to cadmium ion  
Pathways : BIOCARTAMAPKinase Signaling Pathway [Genes]   
Pathways : KEGGMAPK signaling pathwayWnt signaling pathwayFocal adhesionToll-like receptor signaling pathwayFc epsilon RI signaling pathwayInsulin signaling pathwayGnRH signaling pathwayAdipocytokine signaling pathwayType II diabetes mellitusEpithelial cell signaling in Helicobacter pylori infectionColorectal cancer
Other databases
Probes
Probes : ImagenesMAPK9 Related clones (RZPD - Berlin)
Literature
PubMed121 Pubmed reference(s) in Entrez
PubGeneMAPK9

Bibliography

JNK2 contains a specificity-determining region responsible for efficient c-Jun binding and phosphorylation.
Kallunki T, Su B, Tsigelny I, Sluss HK, Dˆ©rijard B, Moore G, Davis R, Karin M
Genes & development. 1994 ; 8 (24) : 2996-3007.
PMID 8001819
 
Daxx, a novel Fas-binding protein that activates JNK and apoptosis.
Yang X, Khosravi-Far R, Chang HY, Baltimore D
Cell. 1997 ; 89 (7) : 1067-1076.
PMID 9215629
 
Stress-induced Fas ligand expression in T cells is mediated through a MEK kinase 1-regulated response element in the Fas ligand promoter.
Faris M, Latinis KM, Kempiak SJ, Koretzky GA, Nel A
Molecular and cellular biology. 1998 ; 18 (9) : 5414-5424.
PMID 9710625
 
JNK targets p53 ubiquitination and degradation in nonstressed cells.
Fuchs SY, Adler V, Buschmann T, Yin Z, Wu X, Jones SN, Ronai Z
Genes & development. 1998 ; 12 (17) : 2658-2663.
PMID 9732264
 
A family of stress-inducible GADD45-like proteins mediate activation of the stress-responsive MTK1/MEKK4 MAPKKK.
Takekawa M, Saito H
Cell. 1998 ; 95 (4) : 521-530.
PMID 9827804
 
Multiple docking sites on substrate proteins form a modular system that mediates recognition by ERK MAP kinase.
Jacobs D, Glossip D, Xing H, Muslin AJ, Kornfeld K
Genes & development. 1999 ; 13 (2) : 163-175.
PMID 9925641
 
Signal transduction by the JNK group of MAP kinases.
Davis RJ
Cell. 2000 ; 103 (2) : 239-252.
PMID 11057897
 
Induction of gadd45beta by NF-kappaB downregulates pro-apoptotic JNK signalling.
De Smaele E, Zazzeroni F, Papa S, Nguyen DU, Jin R, Jones J, Cong R, Franzoso G
Nature. 2001 ; 414 (6861) : 308-313.
PMID 11713530
 
Ubiquitin-protein ligase activity of X-linked inhibitor of apoptosis protein promotes proteasomal degradation of caspase-3 and enhances its anti-apoptotic effect in Fas-induced cell death.
Suzuki Y, Nakabayashi Y, Takahashi R
Proceedings of the National Academy of Sciences of the United States of America. 2001 ; 98 (15) : 8662-8667.
PMID 11447297
 
Inhibition of JNK activation through NF-kappaB target genes.
Tang G, Minemoto Y, Dibling B, Purcell NH, Li Z, Karin M, Lin A
Nature. 2001 ; 414 (6861) : 313-317.
PMID 11713531
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written01-2003Fei Chen

Citation

This paper should be referenced as such :
Chen F . MAPK9 (mitogen-activated protein kinase 9). Atlas Genet Cytogenet Oncol Haematol. January 2003 .
URL : http://AtlasGeneticsOncology.org/Genes/JNK2ID426.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 6 13:38:50 CET 2010

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.