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MDM2 (transformed mouse 3T3 cell double minute 2, p53 binding protein)

Identity

Other namesHDMX
hdm2
HGNC (Hugo) MDM2
Location 12q15
Location_base_pair Starts at 67488238 and ends at 67525478 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Description The gene encompasses 33 kb of DNA; 12 exons.
Transcription 2.3 kb nucleotides mRNA. 1476 b open reading frame.

Protein

Description 491 amino acids; 90 kDa protein.
Expression Expression of MDM2 during embryogenesis was studied in mice. During 14.5 to 18.5 days of prenatal development, the nasal respiratory epithelium expresses high levels of MDM2 RNA and protein in both wild type and p53 null embryos. MDM2 expression during development is tissue-specific and is independent of p53. The mdm2 basal mRNA expression appears relatively moderate in most organs in adult mice.
MDM2 gene was overexpressed in some types of leukemias and lymphomas. Overexpression was significantly more frequent in the low-grade type of B-cell non-Hodgkin's lymphoma (B-NHL) than in the intermediate/high grade types of lymphoma and the overexpression was also significantly more frequent in the advanced rather than the earlier stages of B-cell chronic lymphocytic leukemia (B-CLL).
Localisation MDM2 protein was found in nucleus and cytoplasm.
Function MDM2 was originally cloned from transformed Balb/c3T3 cell line called 3T3DM and was identified as an amplified oncogene in murine cell lines. MDM2 was shown to be amplified in approximately 30% of osteosarcomas and soft tissue tumors and was subsequently found to act as an ubiquitin ligase promoting proteasome dependent degradation of p53. MDM2 is also a transcriptional target of p53 such that p53 activity controls the expression and protein level of its own negative regulator, providing for an elegant feedback loop. MDM2 inhibits the G1 arrest and apoptosis functions of the p53 tumor suppressor protein. The MDM2-p53 complex also inhibits p53 mediated transactivation.
MDM2 knockout mouse embryos died during development and deletion of the p53 gene rescues MDM2 null embryos. These studies suggested that p53 is lethal in the absence of MDM2 during mouse development and MDM2 is a critical regulator to control p53 activity.
In addition, MDM2 involves nuclear export of p53 protein. Interaction between the p53 and MDM2 is not sufficient to mediate p53 degradation. The p53­MDM2 complex must be shuttled from the nucleus to the cytoplasm in order for p53 degradation.
Besides, the MDM2 protein also promotes RB (retinoblastoma) protein degradation in a proteasome-dependent manner in human tumor cell lines. MDM2 overexpression contributes to cancer development in part by destabilizing RB.
Interaction between MDM2 and the tumor suppressor genes p53 and Rb lead to deregulate cell proliferation and apoptosis. MDM2 is a key factor in human tumorigenesis.
Both MDM2 and Pirh2 (RCHY1) proteins are p53 ubiquitin-protein E3 ligases promoting for degradation of p53 protein. However, MDM2 operates in a distinct manner from Pirh2 in response to DNA damage in cancer cells. MDM2 protein is reduced or absent in the p53 null cells compared to the p53 positive cells, Whereas, Pirh2 expression is not affected by the status of p53.
A single nucleotide polymorphism (SNP309) found in the MDM2 promoter is shown to increase the affinity of the transcriptional activator Sp1, resulting in higher levels of MDM2 RNA and protein and the subsequent attenuation of the p53 pathway. In humans, SNP309 is shown to associate with accelerated tumor formation in both hereditary and sporadic cancers.
Homology The MDM2 gene has been identified in various organisms including mammals, amphibians and fishes. It belongs to the ring finger ubiquitin protein E3 ligase family, containing Conserved RING-finger Domain.

Mutations

Note MDM2 mutations are uncommon. Point mutations were reported in human cancers.

Implicated in

Entity Soft tissue tumors and osteosarcomas.
Disease A set of data of MDM2 amplification based on 3889 samples from tumors or xenografts from 28 tumor types from previously published sources was collected. The overall frequency of MDM2 amplification in these human tumors was 7%. Gene amplification was observed in 19 tumor types, with the highest frequency observed in soft tissue tumors (20%), osteosarcomas (16%) and esophageal carcinomas (13%).
Oncogenesis MDM2 is amplified in many cancers. Because the MDM2 is an ubiquitin-protein ligase that promotes p53 protein degradation, the increased MDM2 protein could play an important role in tumorigenesis, especially in the development of soft tissue tumors, osteosarcomas and esophageal carcinomas.
  

External links

Nomenclature
HGNC (Hugo)MDM2   6973
Entrez_Gene (NCBI)MDM2  4193  Mdm2 p53 binding protein homolog (mouse)
Cards
AtlasMDM2ID115ch12q15
GeneCards (Weizmann)MDM2
Ensembl (Hinxton)ENSG00000135679 [Gene_View]  MDM2 [Vega]
AceView (NCBI)MDM2
Genatlas (Paris)MDM2
euGene (Indiana)4193
SOURCE (Stanford)NM_001145336 NM_001145337 NM_001145339 NM_001145340 NM_002392 NM_006878 NM_006879 NM_006881 NM_006882
Genomic and cartography
GoldenPath (UCSC)MDM2  -  12q15   chr12:67488238-67525478 +  12q13-q14   [Description]    (hg18-Mar_2006)
EnsemblMDM2 - 12q13-q14 [CytoView]
Mapping of homologs : NCBIMDM2 [Mapview]
OMIM164785   
Gene and transcription
Gene : Genbank (Entrez)AF092843 AF092844 AF092845 AF201370 AF201371
Reference sequence (RefSeq transcript) :SRSNM_001145336 NM_001145337 NM_001145339 NM_001145340 NM_002392 NM_006878 NM_006879 NM_006881 NM_006882
Reference transcript : EntrezNM_001145336 NM_001145337 NM_001145339 NM_001145340 NM_002392 NM_006878 NM_006879 NM_006881 NM_006882
RefSeq genomic : SRSAC_000055 AC_000144 NC_000012 NT_029419 NW_001838060 NW_925395
RefSeq genomic : EntrezAC_000055 AC_000144 NC_000012 NT_029419 NW_001838060 NW_925395
Consensus coding sequences : CCDS NCBIMDM2
Cluster EST : UnigeneHs.567303 [ SRS ] Hs.567303 [ NCBI ]
Alternative Splicing : Fast-db (Paris)10348
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ00987 (SRS) Q00987 (Expasy) Q00987 (Uniprot)
With graphics : InterProQ00987
Splice isoforms : VarSplice FASTAQ00987(VarSplice FASTA)
Domaine pattern : Prosite (SRS)ZF_RANBP2_1 (PS01358)    ZF_RANBP2_2 (PS50199)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domain pattern : Prosite (Expaxy)ZF_RANBP2_1 (PS01358)    ZF_RANBP2_2 (PS50199)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domains : Interpro (SRS)p53_neg-reg_MDM_2/4    SWIB_MDM2    Znf_RanBP2    Znf_RING   
Domains : Interpro (EBI)p53_neg-reg_MDM_2/4    SWIB_MDM2    Znf_RanBP2    Znf_RING   
Related proteins : CluSTrQ00987
Domain families : Pfam SRSSWIB (PF02201)    zf-RanBP (PF00641)   
Domain families : Pfam SangerSWIB (PF02201)    zf-RanBP (PF00641)   
Domain families : Pfam NCBIpfam02201    pfam00641   
Domain families : Smart EMBLRING (SM00184)
Blocks (Seattle)Q00987
Crystal structure of protein : PDB SRS1RV1    1T4E    1T4F    1YCR    1Z1M    2AXI    2C6A    2C6B    2F1Y    2FOP    2GV2    2HDP    2VJE    2VJF   
Crystal structure of protein : PDBSum1RV1    1T4E    1T4F    1YCR    1Z1M    2AXI    2C6A    2C6B    2F1Y    2FOP    2GV2    2HDP    2VJE    2VJF   
Crystal structure of protein : IMB1RV1    1T4E    1T4F    1YCR    1Z1M    2AXI    2C6A    2C6B    2F1Y    2FOP    2GV2    2HDP    2VJE    2VJF   
Crystal structure of protein : PDB RSDB1RV1    1T4E    1T4F    1YCR    1Z1M    2AXI    2C6A    2C6B    2F1Y    2FOP    2GV2    2HDP    2VJE    2VJF   
HPRD01272
Protein Interaction databases
DIP (DOE-UCLA)Q00987
IntAct (EBI)Q00987
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIMDM2
SNP : GeneSNP UtahMDM2
SNP : HGBaseMDM2
Genetic variants : HAPMAPMDM2
Somatic Mutations in Cancer : COSMICMDM2 
Mutations and Diseases : HGMDMDM2
Hereditary diseases : OMIM164785   
Hereditary diseases : GENETests164785   
Diseases : Genetic AssociationMDM2
General knowledge
Homologs : HomoloGeneMDM2
Homology/Alignments : Family Browser UCSCMDM2
Phylogenetic Trees/Animal Genes : TreeFamMDM2
Catalytic activity : Enzyme6.3.2.- [ Enzyme-Expasy ]   6.3.2.- [ Enzyme-SRS ]   6.3.2.- [ IntEnz-EBI ]   6.3.2.- [ BRENDA ]   6.3.2.- [ KEGG ]   
Chemical/Protein Interactions : CTD4193
Keywords Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  negative regulation of transcription from RNA polymerase II promoter  ubiquitin-protein ligase activity  intracellular  insoluble fraction  nucleus  nucleoplasm  nucleoplasm  nucleolus  cytoplasm  cytosol  protein complex assembly  zinc ion binding  negative regulation of cell proliferation  protein ubiquitination  ligase activity  basal transcription repressor activity  basal transcription repressor activity  enzyme binding  modification-dependent protein catabolic process  regulation of protein catabolic process  identical protein binding  interspecies interaction between organisms  metal ion binding  
Keywords Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  negative regulation of transcription from RNA polymerase II promoter  ubiquitin-protein ligase activity  intracellular  insoluble fraction  nucleus  nucleoplasm  nucleoplasm  nucleolus  cytoplasm  cytosol  protein complex assembly  zinc ion binding  negative regulation of cell proliferation  protein ubiquitination  ligase activity  basal transcription repressor activity  basal transcription repressor activity  enzyme binding  modification-dependent protein catabolic process  regulation of protein catabolic process  identical protein binding  interspecies interaction between organisms  metal ion binding  
Pathways : BIOCARTAHIV-I Nef: negative effector of Fas and TNF [Genes]    Tumor Suppressor Arf Inhibits Ribosomal Biogenesis [Genes]    ATM Signaling Pathway [Genes]    CTCF: First Multivalent Nuclear Factor [Genes]    Cell Cycle: G2/M Checkpoint [Genes]    p53 Signaling Pathway [Genes]    Hypoxia and p53 in the Cardiovascular system [Genes]    Sumoylation by RanBP2 Regulates Transcriptional Repression [Genes]   
Pathways : KEGGCell cycle
Other databases
Probes
Probes : ImagenesMDM2 Related clones (RZPD - Berlin)
Literature
PubMed485 Pubmed reference(s) in Entrez
PubGeneMDM2

Bibliography

Molecular analysis and chromosomal mapping of amplified genes isolated from a transformed mouse 3T3 cell line.
Cahilly-Snyder L, Yang-Feng T, Francke U, George DL
Somatic cell and molecular genetics. 1987 ; 13 (3) : 235-244.
PMID 3474784
 
Tumorigenic potential associated with enhanced expression of a gene that is amplified in a mouse tumor cell line.
Fakharzadeh SS, Trusko SP, George DL
The EMBO journal. 1991 ; 10 (6) : 1565-1569.
PMID 2026149
 
The mdm-2 oncogene product forms a complex with the p53 protein and inhibits p53-mediated transactivation.
Momand J, Zambetti GP, Olson DC, George D, Levine AJ
Cell. 1992 ; 69 (7) : 1237-1245.
PMID 1535557
 
Amplification of a gene encoding a p53-associated protein in human sarcomas.
Oliner JD, Kinzler KW, Meltzer PS, George DL, Vogelstein B
Nature. 1992 ; 358 (6381) : 80-83.
PMID 1614537
 
mdm2 expression is induced by wild type p53 activity.
Barak Y, Juven T, Haffner R, Oren M
The EMBO journal. 1993 ; 12 (2) : 461-468.
PMID 8440237
 
Oncoprotein MDM2 conceals the activation domain of tumour suppressor p53.
Oliner JD, Pietenpol JA, Thiagalingam S, Gyuris J, Kinzler KW, Vogelstein B
Nature. 1993 ; 362 (6423) : 857-860.
PMID 8479525
 
The mdm-2 gene is induced in response to UV light in a p53-dependent manner.
Perry ME, Piette J, Zawadzki JA, Harvey D, Levine AJ
Proceedings of the National Academy of Sciences of the United States of America. 1993 ; 90 (24) : 11623-11627.
PMID 8265599
 
Interactions between p53 and MDM2 in a mammalian cell cycle checkpoint pathway.
Chen CY, Oliner JD, Zhan Q, Fornace AJ Jr, Vogelstein B, Kastan MB
Proceedings of the National Academy of Sciences of the United States of America. 1994 ; 91 (7) : 2684-2688.
PMID 8146175
 
Rescue of embryonic lethality in Mdm2-deficient mice by absence of p53.
Jones SN, Roe AE, Donehower LA, Bradley A
Nature. 1995 ; 378 (6553) : 206-208.
PMID 7477327
 
Rescue of early embryonic lethality in mdm2-deficient mice by deletion of p53.
Montes de Oca Luna R, Wagner DS, Lozano G
Nature. 1995 ; 378 (6553) : 203-206.
PMID 7477326
 
mdm-2 inhibits the G1 arrest and apoptosis functions of the p53 tumor suppressor protein.
Chen J, Wu X, Lin J, Levine AJ
Molecular and cellular biology. 1996 ; 16 (5) : 2445-2452.
PMID 8628312
 
Overexpression of the MDM2 oncogene in leukemia and lymphoma.
Watanabe T, Ichikawa A, Saito H, Hotta T
Leukemia & lymphoma. 1996 ; 21 (5-6) : 391-397.
PMID 9172803
 
Mdm2 promotes the rapid degradation of p53.
Haupt Y, Maya R, Kazaz A, Oren M
Nature. 1997 ; 387 (6630) : 296-299.
PMID 9153395
 
Oncoprotein MDM2 is a ubiquitin ligase E3 for tumor suppressor p53.
Honda R, Tanaka H, Yasuda H
FEBS letters. 1997 ; 420 (1) : 25-27.
PMID 9450543
 
Regulation of p53 stability by Mdm2.
Kubbutat MH, Jones SN, Vousden KH
Nature. 1997 ; 387 (6630) : 299-303.
PMID 9153396
 
Point mutations and nucleotide insertions in the MDM2 zinc finger structure of human tumours.
Schlott T, Reimer S, Jahns A, Ohlenbusch A, Ruschenburg I, Nagel H, Droese M
The Journal of pathology. 1997 ; 182 (1) : 54-61.
PMID 9227342
 
Nuclear export is required for degradation of endogenous p53 by MDM2 and human papillomavirus E6.
Freedman DA, Levine AJ
Molecular and cellular biology. 1998 ; 18 (12) : 7288-7293.
PMID 9819415
 
MDM2 expression during mouse embryogenesis and the requirement of p53.
Lˆ©veillard T, Gorry P, Niederreither K, Wasylyk B
Mechanisms of development. 1998 ; 74 (1-2) : 189-193.
PMID 9651526
 
The MDM2 gene amplification database.
Momand J, Jung D, Wilczynski S, Niland J
Nucleic acids research. 1998 ; 26 (15) : 3453-3459.
PMID 9671804
 
P19(ARF) stabilizes p53 by blocking nucleo-cytoplasmic shuttling of Mdm2.
Tao W, Levine AJ
Proceedings of the National Academy of Sciences of the United States of America. 1999 ; 96 (12) : 6937-6941.
PMID 10359817
 
A single nucleotide polymorphism in the MDM2 promoter attenuates the p53 tumor suppressor pathway and accelerates tumor formation in humans.
Bond GL, Hu W, Bond EE, Robins H, Lutzker SG, Arva NC, Bargonetti J, Bartel F, Taubert H, Wuerl P, Onel K, Yip L, Hwang SJ, Strong LC, Lozano G, Levine AJ
Cell. 2004 ; 119 (5) : 591-602.
PMID 15550242
 
MDM2 promotes proteasome-dependent ubiquitin-independent degradation of retinoblastoma protein.
Sdek P, Ying H, Chang DL, Qiu W, Zheng H, Touitou R, Allday MJ, Xiao ZX
Molecular cell. 2005 ; 20 (5) : 699-708.
PMID 16337594
 
Differential response between the p53 ubiquitin-protein ligases Pirh2 and MdM2 following DNA damage in human cancer cells.
Duan W, Gao L, Wu X, Zhang Y, Otterson GA, Villalona-Calero MA
Experimental cell research. 2006 ; 312 (17) : 3370-3378.
PMID 16934800
 
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Contributor(s)

Written12-2006Wenrui Duan, Miguel A Villalona-Calero

Citation

This paper should be referenced as such :
Duan W, Villalona-Calero MA . MDM2 (transformed mouse 3T3 cell double minute 2, p53 binding protein). Atlas Genet Cytogenet Oncol Haematol. December 2006 .
URL : http://AtlasGeneticsOncology.org/Genes/MDM2ID115ch12q15.html

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indexed on : Sat Jun 27 16:41:07 CEST 2009

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