NOTCH3 (Notch homolog 3 (Drosophila))
2007-08-01 Tian-Li Wang   AffiliationDepartments of Gynecology\\\/Obstetrics, Oncology Johns Hopkins Medical Institutions CRBII, Rm: 306 1550 Orleans Street Baltimore, MD 21231, USA
Identity
HGNC
LOCATION
19p13.12
LOCUSID
ALIAS
CADASIL,CADASIL1,CASIL,IMF2,LMNS
FUSION GENES
DNA/RNA
Description
The Notch3 gene is encoded by 33 exons spanning 41.35 kb that are located on Chromosome 19p13.12.
Transcription
8.089 Kb mRNA, the coding sequence is from 77 bp-7042 bp.
Proteins
Note
2321 amino acids with a predicted molecular mass of 243.66 Kd.
Single-pass type I membrane protein. Contain 1 signal peptide, 36 extracellular EGF repeats, 1 single transmembrane domain, and 2 PEST domains.
Synthesized in the endoplasmic reticulum as an inactive form, which is cleaved by a furin-like convertase in the trans-Golgi complex before it reaches the plasma membrane to yield an active, ligand-accessible form. Cleavage results in a transmembrane Notch subunit (NTM) and an extracellular Notch subunit (ECN).
Single-pass type I membrane protein. Contain 1 signal peptide, 36 extracellular EGF repeats, 1 single transmembrane domain, and 2 PEST domains.
Synthesized in the endoplasmic reticulum as an inactive form, which is cleaved by a furin-like convertase in the trans-Golgi complex before it reaches the plasma membrane to yield an active, ligand-accessible form. Cleavage results in a transmembrane Notch subunit (NTM) and an extracellular Notch subunit (ECN).
Description
Notch3 is a cell surface receptor for membrane-bound ligands including Jagged1, Jagged2, Delta-like1, Delta-like3 and Delta-like4. It is activated by ligand-receptor interaction, which triggers two successive proteolytic cleavages that release the active intracellular domain of Notch (NICD). The NICD translocates to the nucleus, where it interacts with CSL (CBF1/RBP-J kappa, Suppressor of Hairless, LAG-1). Binding of NICD to CSL displaces corepressor complexes and recruits coactivators, leading to transcription from promoters containing CSL-binding elements. The Notch3 target genes participate in wide spectrum of biological processes such as differentiation, proliferation and apoptosis.
Expression
Expressed in certain types of fetal and adult tissues.
Localisation
Mainly located at cell membrane. Following proteolytic events upon ligand binding, its intracellular domain is translocated into the nuclei.
Function
Notch3 is a membrane receptor that mediates cell-cell interactions to facilitate cell differentiation, growth and cell death.
Mutations
Germinal
Mutation in NOTCH3 is associated with cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL). CADASIL is an adult-onset disorder characterized by recurrent ischemic strokes, dementia, and premature death. It affects predominantly the small cerebral arteries, leads to progressive degeneration of vasculature smooth-muscle cells.
Disease-associated mutations are distributed throughout the epidermal growth factor-like repeats (EGFRs) that compose the extracellular domain of the Notch3 receptor and result in a loss or a gain of a cysteine residue in one of these EGFRs. Mutation hotspots were located at the two exons encoding the first five EGFRs. The findings suggested that aberrant dimerization of NOTCH3, due to abnormal disulfide bridging with NOTCH3 molecule or another protein, may be involved in the pathogenesis of CADASIL.
Disease-associated mutations are distributed throughout the epidermal growth factor-like repeats (EGFRs) that compose the extracellular domain of the Notch3 receptor and result in a loss or a gain of a cysteine residue in one of these EGFRs. Mutation hotspots were located at the two exons encoding the first five EGFRs. The findings suggested that aberrant dimerization of NOTCH3, due to abnormal disulfide bridging with NOTCH3 molecule or another protein, may be involved in the pathogenesis of CADASIL.
Somatic
Somatic sequence mutations, gene translocation and amplification of chromosomal locus involved Notch3 gene were identified in T-cell lymphoma, non-small-cell lung cancer and ovarian cancer, respectively.
Implicated in
Entity name
Non-small-cell lung cancer
Cytogenetics
t(15;19)(q11;p13)
Hybrid gene
A breakpoint was localized to the cosmid R31546. The breakpoint was found about 50 kilobases (kb) upstream of the Notch3 and within the 3 untranslated region of a putative gene, Hunk1, on 19p. Translocation of chromosome 19p was also found in several other chromosomes, including chromosomes 12q, 14q, 17q, 4q, and 6q. Overexpression of Notch3 full-length mRNA is associated with a 19p translocation.
Oncogenesis
The translocation is associated with Notch3 over-expression. Transgenic mouse study by constitutive expression of intracellular domain of Notch3 in lung epithelium using surfactant protein C promoter/enhancer resulted in inhibited differentiation of epithelial lung cell, altered lung morphology, and perinatal lethality in the transgenic mice.
Entity name
Ovarian cancer-serous type
Cytogenetics
Chromosome 19p13.12 amplification harboring the Notch3 gene is frequently identified in ovarian cancer.
Oncogenesis
In vitro study demonstrated that cell lines with Notch3 over-expression are more sensitive to the anti-proliferative effect of Notch3 signaling pathway inhibitors including gamma-secretase inhibitor and Notch3-specific siRNA.
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 12673204 | 2003 | Constitutive activation of Notch3 inhibits terminal epithelial differentiation in lungs of transgenic mice. | Dang TP et al |
| 10944559 | 2000 | Chromosome 19 translocation, overexpression of Notch3, and human lung cancer. | Dang TP et al |
| 16778208 | 2006 | Notch3 gene amplification in ovarian cancer. | Park JT et al |
Other Information
Locus ID:
NCBI: 4854
MIM: 600276
HGNC: 7883
Ensembl: ENSG00000074181
Variants:
dbSNP: 4854
ClinVar: 4854
TCGA: ENSG00000074181
COSMIC: NOTCH3
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000074181 | ENST00000263388 | Q9UM47 |
| ENSG00000074181 | ENST00000595514 | M0QZN3 |
| ENSG00000074181 | ENST00000597756 | M0QX38 |
| ENSG00000074181 | ENST00000601011 | M0R3C9 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 37971882 | 2024 | DLL4/Notch3/WNT5B axis mediates bidirectional prometastatic crosstalk between melanoma and lymphatic endothelial cells. | 0 |
| 38115797 | 2024 | NOTCH3 promotes docetaxel resistance of prostate cancer cells through regulating TUBB3 and MAPK signaling pathway. | 1 |
| 38254727 | 2024 | Progress to Clarify How NOTCH3 Mutations Lead to CADASIL, a Hereditary Cerebral Small Vessel Disease. | 1 |
| 38331752 | 2024 | LncRNA WWTR1-AS1 upregulates Notch3 through miR-136 to increase cancer cell stemness in cervical squamous cell carcinoma. | 0 |
| 38335304 | 2024 | Single-Cell Analysis Identifies NOTCH3-Mediated Interactions between Stromal Cells That Promote Microenvironment Remodeling and Invasion in Lung Adenocarcinoma. | 2 |
| 38342606 | 2024 | Myofibrillogenesis Regulator-1 Regulates the Ubiquitin Lysosomal Pathway of Notch3 Intracellular Domain Through E3 Ubiquitin-Protein Ligase Itchy Homolog in the Metastasis of Non-Small Cell Lung Cancer. | 1 |
| 38348813 | 2024 | Association of Rare NOTCH3 Variants With Prevalent and Incident Stroke and Dementia in the General Population. | 0 |
| 37971882 | 2024 | DLL4/Notch3/WNT5B axis mediates bidirectional prometastatic crosstalk between melanoma and lymphatic endothelial cells. | 0 |
| 38115797 | 2024 | NOTCH3 promotes docetaxel resistance of prostate cancer cells through regulating TUBB3 and MAPK signaling pathway. | 1 |
| 38254727 | 2024 | Progress to Clarify How NOTCH3 Mutations Lead to CADASIL, a Hereditary Cerebral Small Vessel Disease. | 1 |
| 38331752 | 2024 | LncRNA WWTR1-AS1 upregulates Notch3 through miR-136 to increase cancer cell stemness in cervical squamous cell carcinoma. | 0 |
| 38335304 | 2024 | Single-Cell Analysis Identifies NOTCH3-Mediated Interactions between Stromal Cells That Promote Microenvironment Remodeling and Invasion in Lung Adenocarcinoma. | 2 |
| 38342606 | 2024 | Myofibrillogenesis Regulator-1 Regulates the Ubiquitin Lysosomal Pathway of Notch3 Intracellular Domain Through E3 Ubiquitin-Protein Ligase Itchy Homolog in the Metastasis of Non-Small Cell Lung Cancer. | 1 |
| 38348813 | 2024 | Association of Rare NOTCH3 Variants With Prevalent and Incident Stroke and Dementia in the General Population. | 0 |
| 36254369 | 2023 | Phenotypic variability in 446 CADASIL patients: Impact of NOTCH3 gene mutation location in addition to the effects of age, sex and vascular risk factors. | 11 |
Citation
Tian-Li Wang
NOTCH3 (Notch homolog 3 (Drosophila))
Atlas Genet Cytogenet Oncol Haematol. 2007-08-01
Online version: http://atlasgeneticsoncology.org/gene/41557/notch3
