Written | 2011-02 | Emily Burns, Bart Vanhaesebroeck |
Centre of Cell Signalling, Barts Cancer Institute, Queen Mary University of London, London, EC1M 6BQ, UK |
Identity |
Alias_names | phosphoinositide-3-kinase, catalytic, delta polypeptide |
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta | |
Alias_symbol (synonym) | p110D |
Other alias | P110DELTA |
PI3K | |
HGNC (Hugo) | PIK3CD |
LocusID (NCBI) | 5293 |
Atlas_Id | 46261 |
Location | 1p36.22 [Link to chromosome band 1p36] |
Location_base_pair | Starts at 9651731 and ends at 9728922 bp from pter ( according to hg19-Feb_2009) [Mapping PIK3CD.png] |
Local_order | Telomere-SPSB1-SLC25A33-TMEM201-PIK3CD-C1orf200-CR604408-KIAAO00911-centromere. |
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Location of PIK3CD on human chromosome 1. | |
Fusion genes (updated 2017) | Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands) |
PIK3CD (1p36.22) / CDS2 (20p12.3) | PIK3CD (1p36.22) / PIK3CD (1p36.22) | PIK3CD (1p36.22) / TNFRSF8 (1p36.22) | |
RERE (1p36.23) / PIK3CD (1p36.22) | SLC35E4 (22q12.2) / PIK3CD (1p36.22) | ZNF814 (19q13.43) / PIK3CD (1p36.22) | |
DNA/RNA |
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The illustration represents the exon structure of the most prevalent transcript in leukocytes, which contains two untranslated exons upstream of the start site (-2a and -1) and 24 coding exons. | |
Description | The PIK3CD gene spans a genomic region of 24 coding exons and over 77.17 kb. |
Transcription | The dominant transcript contains two upstream untranslated exons, -2a and -1, as well as an additional first untranslated exon (-2b) identified in the human PIK3CD gene (Kok et al., 2009). |
Protein |
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p110delta protein domains. p110delta interacts with its associated p85 regulatory subunit via the adaptor binding domain (ABD). The C Lobe and N Lobe together form the catalytic domain. | |
Description | The PI3K enzymes are a family of activation dependent lipid kinases, which have been divided into three classes (Vanhaesebroeck et al., 1999a). PIK3CD encodes p110delta which belongs to the class I PI3Ks alongside p110alpha, p110beta and p110gamma. The PI3K enzymes are heterodimeric molecules which consist of a catalytic p110 subunit, and a constitutively bound p85 regulatory unit of which there are five isoforms encoded by three genes (PIK3R1, PIK3R2 and PIK3R3) (Vanhaesebroeck and Waterfield, 1999; Geering et al., 2007). |
Expression | p110delta has a restricted expression pattern; it is highly expressed in leukocytes (Seki et al., 1997; Vanhaesebroeck et al., 1997) and to a lesser extent expressed in neurons (Eickholt et al., 2007). In addition p110delta expression has also been observed in a number of cancerous tissues including breast cancer and melanoma cells (Sawyer et al., 2003). A transcription factor binding cluster located immediately upstream of the untranslated exon -2a in the human gene, has been identified and found to have enhanced promotor activity in leukocytes. This promoter region may therefore facilitate the enhanced expression of p110delta in leukocytes (Kok et al., 2009). |
Localisation | p110 delta localises to the cytosol and is recruited to the periplasmic region upon stimulation of upstream activators. |
Function | Cell signalling and lipid kinase activity. PI3K signalling has been found to play a crucial role in the regulation of numerous cellular processes including proliferation, metabolism (Foukas et al., 2006; Engelman et al., 2006), and migration (Papakonstanti et al., 2007). Active p110delta initiates signalling cascades by phosphorylating phosphoinositide (PI) lipids such as PIP2 producing pools of PIP3 in the periplasmic region (Vanhaesebroeck et al., 1997). A wide range of effector proteins recognise and interact with the PI species produced, and the resulting alteration in location and activities of these effectors initiates a number of signalling cascades. The classical effector of PI3K signalling is the serine/threonin kinase AKT (aka protein kinase B), which contains a pleckstrin homology (PH) domain that interacts with PIP3 (Franke et al., 1997). The affinity of Akt for PIP3 facilitates activation of Akt's protein kinase activity, resulting in activity-modifying phosphorylation of a range of downstream Akt targets. Roles of p110delta in immune function. The role of p110delta in vivo has been studied in a p110delta null mouse (Clayton et al., 2002; Jou et al., 2002) and in a p110delta kinase-dead mouse known as p110deltaD910A/D910A (Okkenhaug et al., 2002). Phenotypic analysis of the p110deltaD910A/D910A mouse revealed an important role for p110delta in immunity; the mice have notable defects in their T and B cell responses, as well as several other immunological abnormalities (Okkenhaug et al., 2002). In vitro and ex vivo studies suggest that p110delta is the predominant PI3K class IA isoform regulating the phenotype and responses of many leukocyte cell types (Vanhaesebroeck et al., 1999b; Puri et al., 2004; Papakonstanti et al., 2008). In mast cells derived from the p110delta kinase-dead mice, ninety percent of the total PI3K lipid kinase activity was dependent on p110delta (Ali et al., 2004). p110delta has been found to be a key player in the induction of amongst other things, proliferation, chemotaxis, and cytokine/chemokine release in response to both physiological stimuli and pathological stimuli, in many leukocytes (Okkenhaug and Vanhaesebroeck, 2003; Dos Santos et al., 2007; Papakonstanti et al., 2008; Dil et al., 2009; Low et al., 2010). |
Homology | p110delta is most homologous to p110beta (Clayton et al., 2001). |
Mutations |
Note | No prevalent p110delta mutations have been observed in primary samples or cell lines. |
Implicated in |
Note | |
Entity | Haematological malignancy |
Note | Constitutive phosphorylation of Akt (indicating constitutive activity) has been observed in many haematological malignancies, and appears to be responsible for or contributing to growth factor-independent proliferation (Min et al., 2003, Ikeda et al., 2010). p110delta appears to be upstream of the constitutively active Akt in these transformed cells; p110delta-selective inhibitors significantly reduce the abberent Akt activation and also results in a reduction in proliferation (Billottet et al., 2006; Ikeda et al., 2010; Herman et al., 2010; Lannutti et al., 2011). Despite the dominance of p110delta in the regulation of proliferation in leukocytes and the abberant activity of it's major downstream target Akt, no mutations or amplifications of p110delta have been observed in these or other haematological malignancies. A series of clinical trials are now underway to assess the effects of selective inhibition of p110delta on refractory haematological malignancies, and preliminary results are promising (Furman, 2010). |
Disease | CLL, T-ALL, B-ALL, DLBCL, AML, and multiple myeloma. |
Entity | Allergic disease (Ali et al., 2004; Lee et al., 2006; Medina-Tato et al., 2007; Park et al., 2008) |
Note | Mast cells derived from p110deltaD910A/D910A mice have a degranulation defect, as do wild-type mast cells treated with a p110delta-selective inhibitor. Specifically cells lacking active p110delta showed a 45-55% reduction in degranulation induced by an antigen-IgE complex, compared to the degranulation observed in WT mast cells (Ali et al., 2004). Furthermore inactivation of p110delta has been shown to attenuate anaphylactic responses in mice (Ali et al., 2004). p110delta-selective inhibitors have been shown to attenuate OVA-induced influx into lungs of total leukocytes, eosinophils, neutrophils, and lymphocytes, as well as reducing the production of a number of pro-inflammatory mediators (Lee et al., 2006). |
Disease | Asthma, allergic rhinitis. |
Entity | Chronic inflammatory conditions |
Note | p110delta has been identified as a major regulator of inflammatory responses in a wide range of leukocytes (including macrophages, neutrophils, mast cells as well as the adaptive immune cells). It it is considered an excellent potential therapeutic target for reducing inflammation both in the acute allergic context but also in the context of chronic inflammatory disorders (Ji et al., 2007; Rommel et al., 2007). The importance of p110delta in the regulation of inflammatory responses is highlighted by the development of spontaneous chronic colonic inflammation in the p110deltaD910A/D910A mice, which has been attributed to a failure to repress inflammatory responses to commensal bacteria in the gut (Uno et al., 2010). Thus p110delta-selective drugs are currently under investigation as a treatment for rheumatoid arthritis, asthma and other inflammatory conditions. |
Disease | Rheumatoid arthritis, inflammatory bowel disease (IBD). |
Bibliography |
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A selective inhibitor of the p110delta isoform of PI 3-kinase inhibits AML cell proliferation and survival and increases the cytotoxic effects of VP16. |
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PMID 16625210 |
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Class IA phosphoinositide 3-kinases are obligate p85-p110 heterodimers. |
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Proc Natl Acad Sci U S A. 2007 May 8;104(19):7809-14. Epub 2007 Apr 30. |
PMID 17470792 |
Phosphatidylinositol 3-kinase-? inhibitor CAL-101 shows promising preclinical activity in chronic lymphocytic leukemia by antagonizing intrinsic and extrinsic cellular survival signals. |
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Blood. 2007 Oct 15;110(8):2940-7. Epub 2007 Jul 12. |
PMID 17626838 |
Essential, nonredundant role for the phosphoinositide 3-kinase p110delta in signaling by the B-cell receptor complex. |
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Mol Cell Biol. 2002 Dec;22(24):8580-91. |
PMID 12446777 |
Regulation of p110delta PI 3-kinase gene expression. |
Kok K, Nock GE, Verrall EA, Mitchell MP, Hommes DW, Peppelenbosch MP, Vanhaesebroeck B. |
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PMID 19357769 |
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PMID 16507763 |
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J Cell Biol. 2010 Sep 20;190(6):1053-65. Epub 2010 Sep 13. |
PMID 20837769 |
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PMID 17614878 |
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PMID 12750723 |
PI3K in lymphocyte development, differentiation and activation. |
Okkenhaug K, Vanhaesebroeck B. |
Nat Rev Immunol. 2003 Apr;3(4):317-30. (REVIEW) |
PMID 12669022 |
Distinct roles of class IA PI3K isoforms in primary and immortalised macrophages. |
Papakonstanti EA, Zwaenepoel O, Bilancio A, Burns E, Nock GE, Houseman B, Shokat K, Ridley AJ, Vanhaesebroeck B. |
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Regulation of breast cancer cell chemotaxis by the phosphoinositide 3-kinase p110delta. |
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PMID 12670921 |
Identification and chromosome assignment of a human gene encoding a novel phosphatidylinositol-3 kinase. |
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Signaling by distinct classes of phosphoinositide 3-kinases. |
Vanhaesebroeck B, Waterfield MD. |
Exp Cell Res. 1999 Nov 25;253(1):239-54. (REVIEW) |
PMID 10579926 |
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PMID 9488453 |
Citation |
This paper should be referenced as such : |
Burns, E ; Vanhaesebroeck, B |
PIK3CD (phosphoinositide-3-kinase, catalytic, delta polypeptide) |
Atlas Genet Cytogenet Oncol Haematol. 2011;15(9):731-734. |
Free journal version : [ pdf ] [ DOI ] |
On line version : http://AtlasGeneticsOncology.org/Genes/PIK3CDID46261ch1p36.html |
Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 3 ] |
Prostate tumors: an overview
del(1)(p36p36) RERE/PIK3CD inv(1)(p35p36) MARCKSL1/PIK3CD |
External links |
REVIEW articles | automatic search in PubMed |
Last year publications | automatic search in PubMed |
© Atlas of Genetics and Cytogenetics in Oncology and Haematology | indexed on : Wed Nov 13 21:48:52 CET 2019 |
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