TYR (tyrosinase (oculocutaneous albinism IA))
2012-06-01 Erin E Mendoza  , Randy Burd   AffiliationDepartment of Nutritional Sciences, University of Arizona, Tucson, AZ 85721, USA
Identity
HGNC
LOCATION
11q14.3
LOCUSID
ALIAS
ATN,CMM8,OCA1,OCA1A,OCAIA,SHEP3
FUSION GENES
DNA/RNA

Diagram of Tyrosinase promoter region adapted from Ray et al. 2007. H5URS(human 5 upstream regulatory sequence), TDE (Tyrosinase distal element), and TPE (Tyrosinase proximal element).
Description
Gene encompasses 80 kb of DNA, 5 exons.
Transcription
2082 bp.
Pseudogene
Tyrosinase Like Gene (TRYL 11p11.2) shares 98,55% sequence identity with the 3 region of Tyrosinase. The sequence similarity lies in exons IV and V and lacks exons I, II, and III (Chaki et al., 2005).
Proteins

Schematic of Tyrosinase Polypeptide adapted from Mashima 1994. SP (signal peptide), EGF (Epidermal growth factor)-like domain, CuA and CuB (Copper binding domains) and TM (transmembrane domain).
Description
529 amino acids; nascent protein is 60 kDa; Posttranslationally modified by glycosylation giving an 80 kDa protein. Contains an 18 amino acid long signal peptide, six N glycosylation sites, two copper binding sites (CuA and CuB) and a transmembrane domain (Mashima, 1994; Kosmadaki et al., 2010).
Expression
Expressed mainly in neural crest derived melanocytes and is sorted into the melanosomes within the melanocyte. Tyrosinase is also found in retinal pigment epithelium cells (Hearing, 2011).
Localisation
Transmembrane protein.
Function
Tyrosinase catalyzes conversion of tyrosine to DOPA; the rate limiting step of melanin biosynthesis and subsequently DOPA to dopaquinone (Olivares et al., 2009).

Tyrosinase catalyzes the conversion of tyrosine to DOPA in the rate-limiting step of melanin biosynthesis.
Homology
The protein tyrosinase related protein 1 (TRP1) is a member of the tyrosinase protein family and utilizes copper as its cofactor. Its function in humans is not well elucidated but is thought to aid in maintaining tyrosinase catalytic activity and stability. It is also involved in maintaining melanosome structure as well as proliferation and cell death of melanocytes (Sarangarajan et al., 2000; Ghanem et al., 2011). Tyrosinase related protein 2 (TRP2), which is also known as DOPAchrome tautomerase catalyzes the conversion of DOPAchrome to 5,6-dihydroxy indole-2-carboxylic acid (DHICA). TRP2 binds 2 zinc ions as cofactors instead of copper (Olivares et al., 2001; Wan et al., 2011).
Mutations
Germinal
Partial or complete deletion of Tyrosinase leads to dysregulation of melanin synthesis within the melanosomes leading to oculocutaneous albinism (OCA1). The presence of non-pathologic polymorphisms results in variations in skin pigmentation. There are a total of 189 reported OCA1 mutations including 148 missense or nonsense, 23 small deletions, 8 small insertions, 2 insertion/deletion type 1, 1 complex rearrangement, and 7 splice site alterations (Ray et al., 2007; Ko et al., 2011).
Implicated in
Entity name
Melanoma
Disease
Highly aggressive neoplasma arising from melanocytes. Melanoma is responsible for the majority of skin cancer related deaths with a very high probability of metastasis. This neoplasm is greatly resistant to most conventional therapies. Due to the longevity of melanocytes, these cells are considered to have a greater mutagenic burden. This burden is also greater due to the position of melanocytes within the skin and their exposure to UV light. Tyrosinase enzymatic activity has been found to be associated with a better prognosis due to its association with functional activity of the tumor supressor p53. Tyrosinase-mediated melanin production signaled by p53 activation is a key protective response to UV damage (Flaherty, 2012; Gilcrest, 2011).
Oncogenesis
Several environmental and genetic factors are involved in the complex process of melanocytic tumorigenesis. Melanin production involving tyrosinase as the rate-limiting step has been shown to protect keratinocytes from DNA damage and oxidative stress from ultra violet radiation; A low incidence of melanoma in darker skinned populations has been observed, indicating a photoprotective role of melanin (Kanavy, 2011).
Entity name
Disease
Autosomal recessive condition that results in partial or complete loss of tyrosinase activity. Complete loss of activity results in the absence of melanin in the skin and eyes and is classified as OCA1A and the presence of only reduced tyrosinase activity is classified as OCA1B. Complete loss of tyrosinase activity results in the total absence of melanin in the skin and hair. The iris in patients with OCA1A is light blue or gray and the retina lacks pigmentation as well. Tyrosinase null patients have greatly reduced visual acuity accompanied by nystagmus, strabismus, and usually photophobia (Ray et al., 2007). Patients with OCA1B present with varying levels of pigment. The hair in these patients is often yellow. The yellow color is a result of the pheomelanin synthesis. Dopaquinone has a high affinity for sulfhydryl compounds and produces pheomelanin as a result, causing yellow pigmentation. Patients with OCA1B often develop pigmentation in the cooler regions of the body, like the extremities (Chiang et al., 2008).
Prognosis
Prognosis in patients is generally good with no system abnormalities other than the loss or reduction in pigmentation. Patients are advised to protect their skin from sun to prevent sunburn (Ray et al., 2007).
Oncogenesis
Transcription of tyrosinase has been shown to increase with activation of the tumor suppressor p53, linking both to the tanning response following exposure to UV damage (Khlgatian et al., 2002 and Cui et al., 2007).
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|
Other Information
Locus ID:
NCBI: 7299
MIM: 606933
HGNC: 12442
Ensembl: ENSG00000077498
Variants:
dbSNP: 7299
ClinVar: 7299
TCGA: ENSG00000077498
COSMIC: TYR
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000077498 | ENST00000263321 | P14679 |
| ENSG00000077498 | ENST00000263321 | L8B082 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 38007394 | 2024 | Dysregulation of tyrosinase activity: a potential link between skin disorders and neurodegeneration. | 1 |
| 38145795 | 2024 | TYR mutation in a Chinese population with oculocutaneous albinism: Molecular characteristics and ophthalmic manifestations. | 0 |
| 38275092 | 2024 | Markers of Oxidative Stress and Tyrosinase Activity in Melasma Patients: A Biochemical Investigation. | 1 |
| 38007394 | 2024 | Dysregulation of tyrosinase activity: a potential link between skin disorders and neurodegeneration. | 1 |
| 38145795 | 2024 | TYR mutation in a Chinese population with oculocutaneous albinism: Molecular characteristics and ophthalmic manifestations. | 0 |
| 38275092 | 2024 | Markers of Oxidative Stress and Tyrosinase Activity in Melasma Patients: A Biochemical Investigation. | 1 |
| 37403904 | 2023 | Identification and characterization of the compound heterozygous variants of TYR gene in a northern Chinese family with Oculocutaneous albinism type 1. | 0 |
| 37471664 | 2023 | Mutational Analysis of TYR, OCA2, SLC45A2, and TYRP1 Genes Identifies Novel and Reported Mutations in Chinese Families with Oculocutaneous Albinism. | 1 |
| 37403904 | 2023 | Identification and characterization of the compound heterozygous variants of TYR gene in a northern Chinese family with Oculocutaneous albinism type 1. | 0 |
| 37471664 | 2023 | Mutational Analysis of TYR, OCA2, SLC45A2, and TYRP1 Genes Identifies Novel and Reported Mutations in Chinese Families with Oculocutaneous Albinism. | 1 |
| 34536557 | 2022 | Hinokitiol-induced decreases of tyrosinase and microphthalmia-associated transcription factor are mediated by the endoplasmic reticulum-associated degradation pathway in human melanoma cells. | 1 |
| 34980106 | 2022 | Novel deletion of exon 3 in TYR gene causing Oculocutaneous albinism 1B in an Indian family along with intellectual disability associated with chromosomal copy number variations. | 1 |
| 35328057 | 2022 | Delineating Novel and Known Pathogenic Variants in TYR, OCA2 and HPS-1 Genes in Eight Oculocutaneous Albinism (OCA) Pakistani Families. | 2 |
| 35413289 | 2022 | Identification and characterization of two novel noncoding tyrosinase (TYR) gene variants leading to oculocutaneous albinism type 1. | 3 |
| 35803923 | 2022 | The contribution of common regulatory and protein-coding TYR variants to the genetic architecture of albinism. | 10 |
Citation
Erin E Mendoza ; Randy Burd
TYR (tyrosinase (oculocutaneous albinism IA))
Atlas Genet Cytogenet Oncol Haematol. 2012-06-01
Online version: http://atlasgeneticsoncology.org/gene/42738/tyr
