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Chromosome 15

Chromosome 15 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 15 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

dic(1;15)(p11;p11)
t(5;15)(p15;q11-13)
t(5;15)(q33;q22)
t(11;15)(q23;q14)
t(12;15)(p13;q25)
t(14;15)(q32;q11-13)
15q13-15 Rearrangements
+15 or trisomy 15 (as sole autosomal abnormality)
t(15;17)(q22;q21)
t(15;17)(q22;q21) in treatment related leukemia
t(15;21)(q22;q22)

Solid Tumors     

t(9;17)(q22;q11)
t(9;15)(q22;q21)
t(12;15)(p13;q25)
t(11;22)(q24;q12)
t(15;19)(q14;p13)

Cancer prone diseases     

Bloom syndrome

All Genes by Location (Kb)
Chromosome 15 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 15 - HUGO Chromosomes
  • Chromosome 15 - GoldenPath - Santa Cruz
  • Chromosome 15 - Ensembl Project
  • Chromosome 15 - Map View - NCBI
  • Chromosome 15 - OMIM Gene map
  • Chromosome 15 - Genomic Variants
  • Chromosome 15 - HAPMAP Project
  • Chromosome 15 - Genome Channel - ORNL
  • Chromosome 15 - LaunchPad HGMIS
  • Chromosome 15 - Human Protein Atlas
  • Chromosome 15 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 15 - Human BAC Resource (NCBI)
  • Chromosome 15 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 15 Cancer GeneWeb
  • Chromosome 15 GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    BCL8 20870.055 15q11.2
    BLM 91293.245 15q26.1
    BUB1B 40453.296 15q15
    C15orf55 34638.065 15q14
    CASC5 40886.446 15q14
    COPS2 49419.549 15q21.2
    CTSH 79214.472 15q25.1
    GCNT3 59910.437 15q21.3
    IGF1R 99192.272 15q26.3
    ITGA11 68594.049 15q23
    MAPK6 52338.657 15q21
    NEIL1 75641.246 15q24.2
    NTRK3 88420.021 15q25
    PKM2 72491.372 15q22
    PLCB2 40580.109 15q15
    PML 74287.143 15q22
    RASGRF1 79270.531 15q24.2
    SHC4 49115.939 15q21.1-q21.2
    SPINT1 41136.273 15q15.1
    TCF12 57364.370 15q21
    THBS1 39873.293 15q15
    TRPM1 31294.024 15q13.3
    UBE3A 25584.285 15q11.2
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ADAM10 58889.076 15q2|15q22
    ADAMTS7 79062.967 15q24.2
    ADAMTSL3 84592.670 15q25.2
    AEN 89169.842 15q26.1
    AKAP13 85923.947 15q24-q25
    ALDH1A2 58247.364 15q21.3
    ALDH1A3 101420.074 15q26.3
    ANP32A 69072.392 15q23
    ANPEP 90328.126 15q25-q26
    APBA2 29346.066 15q11-q12
    AQP9 58430.555 15q
    ARHGAP11A 32907.771 15q13.2
    ARID3B 74833.598 15q24
    ARIH1 72862.617 15q24
    ARNT2 80735.304 15q24
    AVEN 34158.428 15q13.1
    B2M 45003.738 15q21-q22.2
    BCL2A1 80253.419 15q24.3
    BCL2L10 52402.045 15q21
    BNIP2 59955.955 15q22.2
    C15orf21 45803.333 15q21.1
    C15orf42 90167.049 15q26.1
    C15orf48 45722.832 15q21.1
    CA12 63616.905 15q22
    CALML4 68486.141 15q23
    CAPN3 42640.300 15q15.1
    CASC4 44705.941 15q15.3
    CCNB2 59397.398 15q22.2
    CCNDBP1 43477.620 15q14-q15
    CCPG1 55647.841 15q21.1
    CD276 73991.980 15q23-q24
    CHP 41571.982 15q13.3
    CHRFAM7A 30665.321 15q13.1
    CHRNA3 78888.978 15q24
    CHRNA5 78857.913 15q24
    CHRNA7 32322.790 15q14
    CIB2 78396.991 15q24
    CKMT1A 43986.076 15q15
    CKMT1B 43886.224 15q15
    CPEB1 83212.585 15q25.2
    CRTC3 91161.148 15q26.1
    CSK 75090.638 15q24.1
    CSNK1G1 64463.828 15q22.1-q22.31
    CSPG4 75967.848 15q24.2
    CYFIP1 23000.229 15q11
    CYP19A1 51502.377 15q21.1
    CYP1A1 75013.094 15q24.1
    CYP1A2 75042.071 15q24.1
    DAPK2 64200.122 15q22.31
    DENND4A 65953.541 15q22.31
    DET1 89055.712 15q25.3
    DLL4 41221.590 15q14
    DNAJA4 78562.358 15q25.1
    DTWD1 49913.249 15q21.2
    DUOX1 45422.191 15q15.3
    DUOX2 45391.226 15q15.3
    DUOXA1 45409.571 15q21.1
    DUOXA2 45406.523 15q15.1
    DUT 48624.429 15q21.1
    DYX1C1 55722.507 15q21.3
    EID1 49170.310 15q21.1
    EIF2AK4 40246.114 15q15.1
    FAM82A2 41028.740 15q15.1
    FAN1 31196.128 15q13.2-q13.3
    FANCI 89821.910 15q26.1
    FBN1 48702.270 15q21.1
    FEM1B 68570.755 15q22
    FES 91427.676 15q26.1
    FGF7 49715.456 15q21.2
    FOXB1 60297.134 15q22
    FURIN 91425.256 15q26.1
    GABRB3 26789.926 15q11.2-q12
    GLDN 51669.457 15q21.2
    GNB5 52414.644 15q21.2
    GREM1 33022.891 15q13.3
    HDC 50534.147 15q21-q22
    HERC1 63900.817 15q22
    HERC2 28356.189 15q13
    HEXA 72636.231 15q24.1
    HMG20A 77775.720 15q24
    HSP90B2P 99798.848 15q26.3
    IDH2 90627.213 15q26.1
    IL16 81598.434 15q26.3
    INO80 41271.090 15q15.1
    IQGAP1 91017.191 15q26.1
    ISG20 89190.142 15q26
    ITPKA 41786.072 15q15.1
    KIAA0101 64658.228 15q22.31
    KIAA1199 81181.891 15q24
    KLF13 31619.057 15q12
    LCMT2 43619.975 15q15.3
    LDHAL6B 59499.084 15q22.2
    LINGO1 77905.368 15q24.3
    LMAN1L 75105.190 15q24.1
    LOXL1 74218.802 15q24-q25|15q22
    LTK 41796.164 15q15.1-q21.1
    MAN2C1 75649.978 15q11-q13
    MAP2K1 66679.249 15q22.1-q22.33
    MAP2K5 67950.907 15q23
    MAPKBP1 42066.721 15q15.1
    MEF2A 100106.155 15q26
    MEIS2 37183.226 15q14
    MESDC2 81270.549 15q13
    MESP2 90303.821 15q26.1
    MEX3B 82334.127 15q25.2
    MFGE8 89441.915 15q25
    MORF4L1 79165.315 15q24
    MYO5A 52605.179 15q21
    NDN 23930.830 15q11.2-q12
    NDNL2 29560.589 15q13.1
    NEDD4 56121.940 15q
    NEO1 73428.325 15q22.3-q23
    NIPA2 23005.348 15q11.2
    NOX5 69324.060 15q23
    NR2F2 96875.334 15q26
    NRG4 76235.384 15q24.2
    NUSAP1 41625.087 15q15.1
    OCA2 28000.024 15q
    ONECUT1 53049.422 15q21.3
    PAK6 40532.800 15q14
    PAR1 25380.788 15q11.2
    PCSK6 101844.133 15q26.3
    PDCD7 65410.974 15q22.31
    PIAS1 68346.664 15q
    PIGB 55641.716 15q21-q22
    POLG 89859.533 15q25
    PPIB 64448.014 15q21-q22
    PRC1 91509.273 15q26.1
    PTPN9 75760.492 15q24.2
    RAB11A 66161.857 15q22.31
    RAB27A 55497.426 15q15-q21.1
    RAB8B 63481.732 15q22.2
    RAD51 40987.377 15q15.1
    RASL12 65345.674 15q11.2-q22.33
    RCN2 77224.090 15q23
    RGMA 93586.636 15q26.1
    RNF111 59359.095 15q21
    RORA 60789.655 15q22.2
    RPS27L 63446.051 15q22.2
    SCG3 51973.666 15q21
    SCG5 32933.876 15q13-q14
    SEMA6D 47476.402 15q21.1
    SIN3A 75663.474 15q24.2
    SLC12A6 34525.462 15q13
    SLC28A1 85427.912 15q25.3
    SMAD6 66994.669 15q21-q22
    SNAP23 42787.885 15q14
    SNRPN 25281.105 15q11.2
    SNURF 25200.135 15q12
    SNX1 64388.189 15q22.31
    SORD 45367.210 15q15.3
    SPRED1 38544.515 15q14
    ST20 80191.246 15q25.1
    ST8SIA2 92937.191 15q26
    STOML1 74275.560 15q24-q25
    SYNM 99645.247 15q26.3
    TJP1 29992.358 15q13
    TLE3 70340.615 15q22
    TLN2 62994.320 15q15-q21
    TMOD2 52107.458 15q21.2
    TMOD3 52121.863 15q21.1-q21.2
    TNFAIP8L3 51348.800 15q21.2
    TP53BP1 43699.413 15q15-q21
    TPM1 63340.598 15q22.1
    TRPM7 50852.490 15q21
    TTBK2 43036.545 15q15.2
    ULK3 75128.459 15q24.1
    UNC45A 91478.528 15q26.1
    USP3 63796.851 15q22.3
    VPS39 42450.910 15q15.1

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    Updated Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_15.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_15.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Wed Sep 1 08:32:00 CEST 2010
    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

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